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On incorporating diffusion and viscosity concepts into compartmental models for analysing faecal marker excretion patterns in ruminants

Deterministic mathematical equations are derived to describe the pattern of marker excretion in the faeces of ruminants under steady-state conditions when diffusion and viscosity concepts are introduced into a simple two-compartment scheme of the gastrointestinal tract. The basic scheme comprises a pure-mixing pool obeying first-order kinetics and a second compartment exhibiting streamline flow. Introduction of a velocity gradient, longitudinal diffusion or both into the second compartment, even with various simplifying assumptions, yields analytically insoluble equations. The impact of these mechanisms is to be investigated numerically rather than analytically in future work.