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Scaling of Parallel Software for Biological Sequences Alignment and Homology Search on the Supercomputer BlueGene / P

The goal of this paper is to propose the performance evaluation of the scaling of parallel software for biological sequence alignment and homology searching based on blast algorithm for sequence searching and clustalw algorithm for multiple sequence alignment on the supercomputer BlueGene/P for the case study of influenza virus sequences variability and homology searching with human genome.