{'fraction_non_alphanumeric': 0.03576600057920649, 'fraction_numerical': 0.01428709334877884, 'mean_word_length': 5.042286380869058, 'pattern_counts': {'":': 0, '<': 8, '<?xml version=': 0, '>': 0, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
Effects of four novel root-end filling materials on the viability of periodontal ligament fibroblasts

Objectives The aim of this in vitro study was to evaluate the biocompatibility of newly proposed root-end filling materials, Biodentine, Micro-Mega mineral trioxide aggregate (MM-MTA), polymethylmethacrylate (PMMA) bone cement, and Smart Dentin Replacement (SDR), in comparison with contemporary root-end filling materials, intermediate restorative material (IRM), Dyract compomer, ProRoot MTA (PMTA), and Vitrebond, using human periodontal ligament (hPDL) fibroblasts. Materials and Methods Ten discs from each material were fabricated in sterile Teflon molds and 24-hour eluates were obtained from each root-end filling material in cell culture media after 1- or 3-day setting. hPDL fibroblasts were plated at a density of 5 × 103/well, and were incubated for 24 hours with 1:1, 1:2, 1:4, and 1:8 dilutions of eluates. Cell viability was evaluated by XTT assay. Data was statistically analysed. Apoptotic/necrotic activity of PDL cells exposed to material eluates was established by flow cytometry. Results The Vitrebond and IRM were significantly more cytotoxic than the other root-end filling materials (p < 0.05). Those cells exposed to the Biodentine and Dyract compomer eluates showed the highest survival rates (p < 0.05), while the PMTA, MM-MTA, SDR, and PMMA groups exhibited similar cell viabilities. Three-day samples were more cytotoxic than 1-day samples (p < 0.05). Eluates from the cements at 1:1 dilution were significantly more cytotoxic (p < 0.05). Vitrebond induced cell necrosis as indicated by flow cytometry. Conclusions This in vitro study demonstrated that Biodentine and Compomer were more biocompatible than the other root-end filling materials. Vitrebond eluate caused necrotic cell death.


INTRODUCTION
Endodontic surgery is an alternative treatment when orthograde root canal therapy/ retreatment fails or nonsurgical retreatment is not an option [1]. Root-end resection procedures include the use of a root-end filling material to provide an effective seal, and to facilitate the repair and regeneration of periradicular tissues. Retrograde filling materials are in close contact with vital tissues around the root apex for extended periods of time; therefore, ideally, reparative root-end filling materials should be noncytotoxic to the proximal tissues.
Various materials with different compositions have been preferred for retrograde filling. Among them, intermediate restorative material (IRM) has shown a high clinical success rate, similar to that of mineral trioxide aggregate (MTA) [2]. However, previous studies have also indicated decreased cell viability characteristics with the use of IRM [3]. Vitrebond, a light cured glass ionomer cement, has been reported to have favorable tissue response when compared with amalgam [4]. Therefore, it was previously considered to be an alternative root-end filling material [5]. Composite resin applied with a dentin bonding agent has also been reported to have good sealing ability when used as a retrograde filling [6]. However, avoiding moisture contamination is of primary importance when placing composite resin to the root-end. Compomers are mixture of composite resins and glass ionomer cements, and these materials are popular in restorative dentistry because of their good mechanical and aesthetic qualities. When placed subgingivally, compomers have exhibited biocompatibility with gingival tissues [7]. In addition, polymethylmethacrylate (PMMA) bone cement (AF cement, Laboratorios, Buenos Aires, Argentina) is designed for medical surgery applications [8]. It is very tolerant of a high moisture environment, and may be a promising root-end filling material; however, little is known about the potential cytotoxicity of PMMA bone cement when placed as a root-end filling material [9].
MTA has been widely used as a retrograde filling material because of its favorable biological properties [10]. Recently developed calcium silicate-based cements, such as Micro-Mega MTA (MM-MTA; Micro-Mega, Besançon, France) and Biodentine (Septodont, Saint-Maur-des-Fossés, France), have been proposed for use as pulp capping, root-end filling, and perforation repair materials. According to the manufacturer, MM-MTA has a reduced setting time of 20 minutes, and better physicochemical characteristics than other MTA formulations. However, Biodentine has been found to display biocompatibility similar to that of MTA [11,12]. To date, our knowledge is limited as to whether MM-MTA and/or Biodentine are sufficient for such clinical applications. Additionally, the apoptotic/necrotic effects of novel root-end filling materials on periodontal ligament (PDL) cells have not been well documented.

Cell culture
The ethics committee of the Selcuk University approved this study, and informed consent was provided prior to the collection of the PDL tissue samples. The human PDL cells were obtained from first premolars that were extracted for orthodontic purposes. After extraction, the teeth were immediately stored in Dulbecco's MEM/Ham's F-12 (1:1 mixture, DMEM/Ham's F-12 [1:1], Biochrom, Berlin, Germany). The PDL tissues from the middle third of the root surface were removed via thorough curetting. Extracted PDL tissue samples were cultured on 100-mm culture dishes (Corning, NY, USA) with the use of explant technique in DMEM/Ham's F-12 (1:1) supplemented with 10% fetal bovine serum (Superior FBS, Biochrom), 100 units/mL of penicillin, and 100 µg/mL of streptomycin (Biochrom). Then, the samples were incubated at 37°C for one week to observe PDL cells (passage zero). When the cells reached confluence, they were subcultured by using 0.25% trypsin/ethylenediaminetetraacetic acid (EDTA) (Biochrom). Passage numbers of 4-7 were used for this study.

Sample preparation
The test materials were prepared according to the manufacturer's instructions under aseptic conditions, and 10 discs from each material were fabricated in sterile Teflon molds (6 mm in diameter and 2 mm thick). Each sample disc was allowed to set for 1 day (n = 5) or 3 days (n = 5) at 37°C and 100% humidity. After setting, the samples were exposed to ultraviolet light for 20 minutes on each surface to ensure sterility [3] and then transferred to 24-well tissue culture plates (Corning). Then, 24-hour eluates were obtained from each material in cell culture media in general accordance with ISO 10993-5 [13]. The original eluates (1:1) were serially diluted with cell culture media to achieve a total of 4 concentrations of each eluate.

XTT assay
The human PDL cells were seeded in 96-well plates, at a density of 5 × 10 3 cells per well, and incubated for 24 hours to allow the attachment of the cells before the addition of the eluates. Then, the culture media was removed, and the fibroblasts were incubated for 24 hours with equal volumes (100 µL) of the 1:1, 1:2, 1:4, and 1:8 concentrations of the eluates. In the control wells, 100 µL of the culture medium was added. After 24 hours of cell exposure to each eluate, the cell viability was determined via XTT assay using a commercial kit (Serva Electrophoresis, Heidelberg, Germany). The eluates were then aspirated and the morphological changes in the PDL cells were immediately photographed under an inverted microscope (×10 magnification, Leica DM IL LED, Leica Microsystems GmbH, Wetzlar, Germany) before adding the XTT working solution. The XTT working solution was prepared as described previously [14]. After the aspiration of the eluates, 100 µL of the colorless culture media and 50 µL of the XTT working solution were added to each well. The metabolic activity of the mitochondria was measured using a microplate spectrophotometer (Epoch, BioTek Instrument Inc., Winooski, VT, USA). The optical density (OD) was determined at a wavelength of 460 nm, and the experiment was repeated 3 times. The cell viabilities were calculated as a percentage relative to the cell control. The impacts of the materials, eluate concentrations, and setting times on the cytotoxicity of the fibroblasts were statistically analyzed using a univariate analysis of variance followed by post hoc Tukey test (α = 0.05). Prism 5.0 (GraphPad Software Inc., La Jolla, CA, USA) was used as the analytical tool.

Flow cytometry
The PDL cells were seeded in 6-well plates at a density of 5 × 10 4 cells/mL, and allowed to attach for 24 hours. The 1:8 concentration eluates from the 3-day setting time samples were chosen for use in the flow cytometry. The eluates were obtained as described in the previous section. After exposing the PDL cells to the selected material eluates for 24 hours, the cells were detached, centrifuged, and resuspended at 1 × 10 4 cells/mL in the 1× binding buffer included in the Apoptosis and Necrosis Quantification kit (BD Pharmingen, San Diego, CA, USA). The cells were stained with Annexin V and 7AAD according to the flow cytometry protocol for a viability assay (BD Pharmingen), and incubated for 20 minutes at room temperature, with protection from the light. The stained cells were analyzed using a flow cytometer (BD Biosciences, San Jose, CA, USA) with 488 nm excitation. Then, the percentage distributions of the vital, early apoptotic, late apoptotic/necrotic, and dead cell populations were determined. Finally, the remaining undiluted eluates were collected and the pH values were measured with pH indicator strips (Merck, Darmstadt, Germany).

Cell morphology analysis
In the control groups, the untreated PDL cells were attached and spread over the tissue culture plate well. They exhibited spindle shapes with elongated cytoplasmic extensions ( Figure 1A). In the IRM, Vitrebond, SDR, PMMA, and MM-MTA groups, some of the cells had become rounded and the morphology of the cells tended to show an altered appearance with retraction ( Figure 1B-1D, 1F, and  1H). Additionally, some particulates were observed adjacent to the cells exposed to the Vitrebond eluates. The cells exposed to the Biodentine and Dyract compomer eluates were fully spread out, showing the typical morphology of fibroblasts (Figure 1E and 1I). In addition, the exposure of the PDL cells to the PMTA for 24 hours induced few morphological changes ( Figure 1G).

Cytotoxicity
The cell viability depended significantly on the type of the material, setting time, and concentration of the eluate that the cells were exposed to (p < 0.05). The results regarding the effects of the materials, setting times, and eluate concentrations on the PDL cell viability are summarized in Figure 2. Overall, the Vitrebond and IRM were significantly more cytotoxic than the other root-end filling materials (p < 0.05). Those cells exposed to the Biodentine and Dyract compomer eluates showed the highest fibroblast survival rates, while the PMTA, MM-MTA, SDR, and PMMA groups exhibited similar cell viabilities. The 3-day samples were more cytotoxic than the 1-day samples for the Biodentine, IRM, PMTA, MM-MTA, and PMMA groups (p < 0.05). However, there was no statistical difference between the 1-day setting and 3-day setting times in the Vitrebond, Dyract compomer, and SDR groups. The 1:1 dilution eluates were significantly more cytotoxic than the eluates at the 1:2, 1:4, and 1:8 dilutions (p < 0.05).

pH analysis
The pH values of the undiluted eluates of the test materials (3-day setting time) are shown in

Apoptosis/necrosis
The representative 2-dimensional flow cytometry dot plot of the data from the test groups and cell control group, and the percentage distributions of the vital, early apoptotic, late apoptotic/necrotic, and dead cells are illustrated in

DISCUSSION
Biocompatibility is one of the most desired properties of a root-end filling material that is placed in contact with vital periradicular tissues for a prolonged period of time. Nonbiocompatible retrograde filling materials may lead to the degeneration of adjacent tissues and delay periradicular healing.
The inverted microscopic observations of the PDL cells exposed to the material eluates presented the interactions between the cells and retrograde fillings visually. Our observations indicated that the PDL cells were healthy when exposed to the Biodentine and Dyract compomer eluates, while the IRM, Vitrebond, SDR, PMMA, and MM-MTA eluates caused retraction in the PDL cells. However, minimal morphological alterations were established in the PMTA group. The microscopic photographs taken during the experiment were consistent with the results of the XTT assay. Unlike the other groups, some particulates were released to the cell culture system in the Vitrebond group. The numerous and intense particles that were present in the Vitrebond eluate may have adversely affected cell growth.
The present study revealed that the IRM was one of the most cytotoxic materials. In addition, several other studies have reported high cytotoxicity in the IRM, probably due to the presence of eugenol, which has been shown to be toxic to fibroblasts [15,16]. Contrarily, a previous in vivo study reported high clinical performance for the IRM, comparable to that of MTA [2]. We speculated that the higher concentrations of the IRM eluate (1:1, 1:2, and 1:4) would cause decreased cell viability, but the cell viability increased when the cells were exposed to the 1:8  Based on the findings of the present study, Vitrebond was the most cytotoxic material (like IRM). These results agreed with those of previous reports in which Vitrebond has exhibited high cytotoxicity [11,17]. The aluminum and fluoride release from the material and the acidity of the eluate may be possible reasons for Vitrebond's toxicity [18]. Our results were also confirmed by Camargo et al. [19], who found that the original Vitrebond eluate caused a 7-fold increase in reactive oxygen species (ROS) production, which may explain one possible cellular toxicity mechanism.
One of the test materials used in this study was SDR, a low shrinkage flowable composite resin designed to be a base under direct restorations and/or a pit and fissure sealant. SDR has been compared with other commercial flowable composites in terms of its cytotoxicity to dental stem cells, and it has been suggested that SDR can be used as a dental restorative material [20]. However, there has been no study evaluating SDR for retrograde filling. Our findings indicated that the SDR exhibited mild toxicity, similar to that of the PMTA. Previously, the monomer content of composite resins has shown cytotoxic effects in high concentrations [21]; therefore, SDR's cytotoxicity may be closely related to its monomer constituent.
Based on the present study, compomers seem to be less cytotoxic materials. However, inconsistent observations have been made in previous studies showing that the toxic potential of compomers is very likely due to the leachable components of the compomers, like bisphenol A glycidyl methacrylate (Bis-GMA), triethylene glycol dimethacrylate (TEGDMA), and urethane dimethacrylate (UDMA) [22,23]. The use of different commercial materials and different methodologies may partially explain the conflicting results. Our present results also suggested that the Dyract compomer was as biocompatible as Biodentine. However, no other study has compared Biodentine and a compomer with regard to the biocompatibility, other than the present study. Therefore, the biocompatibility of compomers needs to be elucidated in future in vivo experiments.
The PMMA caused a cell reduction similar to those of the MM-MTA, SDR, and PMTA. Previous studies evaluating PMMA as a retrograde filling generally examined this material in terms of its sealing ability. The findings obtained in the present study are in general agreement with the results of Badr [9], which reported the similar cytotoxic effects of PMMA and MTA on fibroblasts. The residual methylmethacrylate monomer may be responsible for the decreased biocompatibility of the PMMA bone cement [24].
The PMTA was statistically ranked as moderate among the other test groups with regard to the cell viability. Although they were not statistically significant, the cell viability values of the PMTA group were lower than those of the MM-MTA, SDR, and PMMA bone cement groups. Our findings are consistent with a previous observation that PMTA has cytotoxic effects on macrophages and fibroblasts [15]. Moreover, the cytotoxicity of the PMTA could be attributed to the toxic heavy metals that were found in the PMTA eluate [25]. The high pH of the PMTA eluate, which may cause cell denaturation, may be another explanation for PMTA's cytotoxicity [15].
There have been few reports researching the cytotoxicity of MM-MTA, which was produced as an alternative to PMTA [26]. Similar to our results, it has been showed previously that PMTA and MM-MTA are similar to each other, presenting a higher cell viability than that of IRM [26]. Kum et al. [27] reported that MM-MTA includes aluminum, arsenic, beryllium, cadmium, chromium, and iron at minimum levels. We can assume that PMTA and MM-MTA contain similar levels of heavy metals, based on previous evidence [27] which can explain the similar biocompatibilities of PMTA and MM-MTA. Furthermore, the original MM-MTA eluate was found to have the highest pH value, which may negatively affect the cell proliferation.
As a new calcium silicate based cement, Biodentine has attracted attention in the field of endodontic surgery. Our present results suggest that Biodentine shows the greatest cell viability. The liquid content of Biodentine includes calcium chloride, which was added to the composition of Portland cement to induce cell growth by releasing calcium from the materials [28]. This calcium chloride seems to contribute to the biocompatibility of Biodentine. Our cytotoxicity findings also indicated that Biodentine is preferable to PMTA. However, the present results are in contrast with the results of other studies that have described similar biocompatibilities for Biodentine and PMTA, based on different methodologies [11,12]. The superior biocompatibility of Biodentine may be explained by the different chemical compositions of these materials. For example, zirconium oxide is included as a radiopacifier in Biodentine, while bismuth oxide provides the radiopacity for the PMTA. One previous study reported that bismuth oxide did not induce cell growth [29], while zirconium oxide was found to be nontoxic to rat fibroblast cells [30]. Another explanation for the lower cytotoxicity of the Biodentine may be the active biosilicate technology that eliminates the metal impurities inherent in MTA cements [31]. A recent study reported that traces of arsenic, lead, and chrome were present in Biodentine eluates [32]. Another study revealed that Biodentine released heavy metals including arsenic, copper, iron, manganese, and zinc [33]. However, Camilleri et al. [32] stated that the amount of arsenic detected in the Biodentine samples was negligible; therefore, Biodentine could be considered a safer material.
The different setting times did not have significant effects on the cell viability in the Vitrebond, SDR, and compomer eluate groups in which the setting reaction was completed via light. However, the 1-day setting time samples were more biocompatible than the 3-day samples in the IRM, Biodentine, PMTA, MM-MTA, and PMMA bone cement groups. Older IRM specimens may exhibit higher toxicity due to the long-term release of eugenol [34]. Camilleri et al. [29] indicated that the 28-day setting MTA cements showed poorer cell growth than the 1-day setting MTA cements. Calcium hydroxide is produced as a result of the primer hydration reaction of the tricalcium silicate cements, which may positively affect the cell growth, but the level of calcium hydroxide diminishes as the material sets [29]. This fact could explain the better biocompatibility of the fresh Biodentine, PMTA, and MM-MTA samples. Moreover, a recent study has reported that the long-term ageing of PMMA based cements enhanced the cytotoxicity of the material [35]. The long-term release of the residual monomer from the PMMA could be responsible for the higher toxicity of the 3-day samples of the PMMA bone cement [35].
The XTT findings of this study revealed that the cell viability was significantly associated with the concentration of the test material eluates, since the higher concentrations were more cytotoxic than the lower concentrations. We aimed to assess the dose-dependent effects and to simulate the clinical conditions by using different concentrations of the material eluates. It has been reported that as the toxic components of the root-end filling materials become