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APLP2 gene polymorphisms are associated with high TC and LDL-C levels in Chinese population in Xinjiang, China

Abstract Hyperlipidemia is one of the main risk factors for coronary artery disease (CAD). In the present study, we aimed to explore whether the single-nucleotide polymorphisms (SNPs) in amyloid precursor-like protein (APLP) 2 (APLP2) gene were associated with high lipid levels in Chinese population in Xinjiang, China. We recruited 1738 subjects (1187 men, 551 women) from the First Affiliated Hospital of Xinjiang Medical University, and genotyped three SNPs (rs2054247, rs3740881 and rs747180) of APLP2 gene in all subjects by using the improved multiplex ligation detection reaction (iMLDR) method. Our study revealed that the rs2054247 SNP was associated with serum total cholesterol (TC), low-density lipoprotein cholesterol (LDL-C) levels, and high-density lipoprotein cholesterol (HDL-C) in additive model (all P<0.05). The rs747180 SNP was associated with serum TC and LDL-C levels in additive model (all P<0.05). Our study revealed that both rs2054247 and rs747180 SNPs of the APLP2 gene were associated with high TC and LDL-C levels in Chinese subjects in Xinjiang.


Introduction
Coronary artery disease (CAD), the leading cause of death, imposes immense health and economic burdens worldwide [1][2][3]. CAD is a complex disease with the involvement of multiple mechanisms, cell types, and is influenced by multiple risk factors such as diabetes, hyperlipidemia, smoking, chronic inflammation, immune diseases, hypertension, physical inactivity, and genetics [4][5][6]. Among these, hyperlipidemia plays a vital role in CAD development [7].
Dyslipidemia is a family of lipoprotein metabolism disorders manifested by elevated total cholesterol (TC), low-density lipoprotein cholesterol (LDL-C), triglycerides (TGs), and reduced high-density lipoprotein cholesterol (HDL-C) concentrations in the blood [8]. Studies showed that increased lipid levels result in vessel wall reactions, including endothelial dysfunction, smooth muscle cells proliferation, lipid accumulation, foam cell formation, and, finally, necrosis and plaque development, which were considered to increase the risk of CAD [9,10]. Genetic factors including single-nucleotide polymorphisms (SNPs) are the main risks that contribute to dyslipidemia.
Amyloid precursor-like protein (APLP) 2 (APLP2) belongs to the protein family that includes amyloid precursor protein (APP) and APLP1 in mammals, which has been associated with Alzheimer's disease pathogenesis [11]. Consistent with this notion, APP and APLP2 are widely expressed in many tissues, whereas APLP1 is predominantly restricted to the neural cells [12][13][14]. APLP2 has been shown to regulate multiple cellular functions such as neurite outgrowth, axogenesis, corneal epithelial wound healing, cell adhesion, migration, and cholesterol homeostasis [15][16][17].
Previous studies have revealed that deletion of APLP2 may increase the development of atherosclerosis in animal models [18]. Researchers found that lack of APLP2 gene led to increased catabolism of apoE/lipoprotein, and resulted in increased intracellular cholesterol levels [19]. However, little is known about APLP2 gene in human population regarding plasma cholesterol levels, as well as the SNPs. Hence, we aimed to investigate the potential relationship between polymorphisms of human APLP2 gene and serum cholesterol levels.

Ethical approval of the study protocol
The present study was approved by the Ethics Committee of the First Affiliated Hospital of Xinjiang Medical University, and was performed in accordance with the principles of the Declaration of Helsinki. Written informed consent was obtained from each participant, including explicit permission for the DNA analyses and the collection of relevant clinical data.

Subjects
We randomly recruited 1826 subjects (1247 men, 579 women) from the First Affiliated Hospital of Xinjiang Medical University between August 2010 and October 2016. The present study included 1738 subjects (1187 men, 551 women) who had complete data on APLP2 genotype, and whole subjects are the residents in Xinjiang province. Exclusion criteria included those suffering from impaired malignancy, connective tissue disease, concomitant valvar heart disease, renal function, valvular disease or chronic inflammatory disease, pancreatic disease, fatty liver, cirrhosis, hepatitis. Moreover, subjects should also be free from thyroid disease, or any history of taking lipid-lowering drugs. Hypertension was defined as a systolic blood pressure ≥ 140 mmHg and/or a diastolic blood pressure ≥ 90 mmHg at least on two distinct occasions [20]. Diabetes mellitus was defined as two fasting plasma glucose (FPG) level ≥ 7.0 mmol/l [21]. The following information was collected: age, gender, hypertension, diabetes, TC, TG, HDL-C, and LDL-C. According to The 2016 Chinese Guidelines for the Management of Dyslipidemia in Adults [22]. high TC was defined as TC ≥ 6.22 mmol/l, high LDL-C was defined as LDL-C ≥ 4.14 mmol/l, low HDL-C was defined as HDL-C ≤ 1.04 mmol/l, and high TG was defined as TG ≥ 2.26 mmol/l. Blood samples were obtained from an antecubital vein into vacutainer tubes containing EDTA in the morning after an overnight fasting period. All the collected samples were transported on dry ice at prearranged intervals to Xinjiang Coronary Artery Disease VIP laboratory. The concentration of serum TC, TG, LDL-C, HDL-C, and FPG were measured by the Clinical Laboratory Department of the First Affiliated Hospital of Xinjiang Medical University with the biochemical analyzer (Dimension AR/AVL Clinical Chemistry System, Newark, NJ, U.S.A.) [23,24].

Genotyping
Using Haploview 4.2 software and International HapMap Project website phase I & II database (http://www.hapmap. org), we obtained three tag SNPs of APLP2: SNP1 (rs2054247), SNP2 (rs3740881) and SNP3 (rs747180) by using minor allele frequency (MAF) ≥ 0.05 and linkage disequilibrium patterns with r 2 ≥ 0.8 as the cutoff. Blood samples were obtained from an antecubital vein into vacutainer tubes containing EDTA in the morning after an overnight fasting period. DNA was extracted from the peripheral blood leukocytes using a whole blood genome extraction kit (Beijing Biotech Corporation, Beijing, China). The SNP genotyping was performed using an improved multiplex ligation detection reaction (iMLDR) technique (Genesky Biotechnologies Inc., Shanghai, China). Genotyping was performed in a blinded fashion without knowledge of the participants' clinical data, and a total of 10% of the genotyped samples were duplicated to monitor genotyping quality.

Statistical analysis
The statistical analysis was performed using SPSS version 22.0 for Windows (SPSS Inc., Chicago, IL, U.S.A.). The Hardy-Weinberg equilibrium was assessed by Chi-square test. The continuous variables are shown as the means + − SD, and the differences between the male and the female subjects were assessed using an independent-sample t test. Differences in the categorical variables, such as the frequencies of smoking, drinking, hypertension, diabetes, and genotypes were analyzed using the chi-square test. Finally, after adjusting confounding variables, general linear model analysis was undertaken to test the association between APLP2 genotypes and lipid profile. In addition, a two-tailed P-value less than 0.05 was considered to be statistically significant.

Clinical characteristics of subjects
The baseline characteristics of 1738 subjects (1187 men, 551 women) are shown in Table 1. The average age of the included subjects was 57.23 + − 10.96 years, The FPG levels and the prevalence of hypertension and diabetes were similar between males and females (all P>0.05). In females, plasma concentration of TC, LDL-C, and HDL-C is higher than males (all P<0.001). Further, in males, the TG levels and the prevalence of smoking and drinking were higher than females (all P<0.001).

Distributions of genotype and allele in subjects
The distribution of genotypes and alleles for the three SNPs (rs2054247, rs3740881, and rs747180) of the APLP2 gene is shown in Table 2. The genotype distributions of these SNPs met the Hardy-Weinberg equilibrium balance (all P>0.05). Our results showed that differences in SNP rs2054247 and SNP rs3740881 between males and females were not significant (all P>0.05; genotypes and additive model). However, our study revealed that the difference in SNP rs747180 distribution of genotype and additive model was significant between males and females for (P=0.013, P=0.012, respectively).

APLP2 genotypes and lipid levels
Our study revealed that the rs2054247 SNP was significantly related to serum TC and LDL-C levels in additive model before (P=0.008, P<0.001) and after multifactor adjustment of ethnicity, gender, age, smoking, drinking, hypertension, and diabetes (P=0.007, P<0.001; Table 3). In addition, the rs2054247 SNP was significantly correlated with serum HDL-C levels in additive model before and after multifactor adjustment (P<0.001, P=0.007; Table 3). When analyzing three genotypes and additive model, we observed that the rs3740881 SNP was not associated with serum lipid levels before and after adjusting multifactor (all P>0.05; Table 4).
Our study showed that the rs747180 SNP was associated with serum TC and LDL-C levels in additive model before (P=0.001, P<0.001) and after multifactor adjustment (P=0.001, P<0.001; Table 5). Furthermore, the rs747180 SNP was correlated with serum HDL-C levels in additive model (P=0.001). Nevertheless, after adjusting multifactor, there were not statistically significant differences.
Finally, our study revealed that there was no significant association among the three SNPs and TG levels in participants (all P>0.05; Tables 3-5).

Discussion
In the present study, we investigated the associations between three SNPs in the human APLP2 gene and cholesterol levels among Chinese subjects in Xinjiang. This is the first attempt to study the common polymorphisms in APLP2 gene and its association with four types of lipid parameters.
APP is a member of a family of homologous APLPs, including APLP1 and APLP2 [25]. The three proteins are highly homologous, sharing 38-51% amino acid sequence identity. APLP1 and APLP2 both undergo proteolytic processing similar to APP. APLP2, similar to APP, is ubiquitous and is expressed in many tissues, whereas APLP1 is found primarily in cells of the nervous system [26][27][28]. Studies in APP and APLP1/2 knockout (KO) mice suggest functional differences among the three family members and, significantly, a particular importance for APLP2 in the physiology of the cholesterol metabolism and coronary artery atherosclerosis [29]. However, the association between APLP2 gene polymorphisms and serum lipid levels was poor.
The relationship between cholesterol levels and APLP2 was first studied by Liu et al. [19]. They investigated apoE and cholesterol levels in mouse embryonic fibroblasts (MEFs) of wildtype (WT), APP-KO, or APP and APLP2 double-KOs (APP/APLP2-DKO). The APP-KO and APP/APLP2-DKO cells displayed a significant decrease in apoE levels and a concomitant increase in cholesterol levels compared with WT controls. Additionally, they measured these changes in vivo, brain apoE, and cholesterol levels in WT, APP-KO, and APP/APLP2-DKO mouse brain. ApoE levels were decreased by 50% in APP-KO and further decreased in APP/APLP2-DKO when compared with WT littermate controls. A corresponding increase in cholesterol levels was also observed in APP-KO and APP/APLP2-DKO mouse brain when compared with WT controls.
Our study showed that rs2054247 was significantly associated with plasma TC and LDL-C levels in additive model. Such association remained significant after multivariate adjustment. As is known to all, hyperlipidemia is the key factor that contributes to the development of atherosclerotic cardiovascular disease (CVD), such as CAD. In present study, we have found that rs2054247 of APLP2 gene was associated with hyperlipidemia among Chinese subjects, and thus assumed AA genotype of rs2054247 might be a risk genetic marker for coronary heart disease (CHD). Together, these results might provide convincing evidence for assuming people who carry A allele may have higher probabilities of suffering from atherosclerotic CVD than people who carry G allele of rs2054247 of APLP2 gene.
We further observed that rs747180 was also significantly associated with plasma TC and LDL-C levels in additive model before and after adjustment. Individuals with GG genotype of rs747180 had higher prevalence of plasma TC and LDL-C levels, indicating that G allele of rs747180 of APLP2 gene may be a risk genetic marker for CVD.
Finally, our study did not show a remarkable difference between TG levels and three kinds of SNPs of APLP2 gene. This might indicate that APLP2 gene does not have as strong correlation with TG concentration as it does with cholesterol concentration. Nevertheless, the relationship between TG concentration and APLP2 gene needs further study.
There are several limitations in our study. First, our subjects were limited to the First Affiliated Hospital of Xinjiang Medical University, and we only drew conclusions based on the present observational association study. Second, the present study lacked functional validation. Additional studies need to be undertaken to clarify the underlying molecular mechanism that associate the APLP2 gene polymorphisms with hyperlipidemia.

Conclusions
In conclusion, our study revealed that rs2054247 and rs747180 of APLP2 gene were associated with high TC and LDL-C levels in Chinese subjects in Xinjiang. Subjects with AA/GA genotype of rs2054247 may have higher risks from suffering hyperlipidemia. In the same way, subjects with GG/GA genotype of rs747180 were associated with an increased risk of hyperlipidemia.

Data Availability
The data will not be shared, since part of the data is being reused by another study.

Ethics Approval
The study was approved by the Ethical Review Board of The First Affiliated Hospital of Xinjiang Medical University. Written informed consent was obtained from all enrolled patients.