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A Method For The RNA-Protein Complexes Recognition

It is important to know RNA-protein pair interact or not. It's also important to know where they interact. If knowing the RNA-protein interaction sites, it's also to know the strength of the biding sites. It is necessary to study the algorithm which can predict the RNA-protein interaction automatically. The coding method is used to express protein characteristics by combining DC and PseAA. This coding method will generate eigenvectors with higher dimension yet. In this paper, the method of simplifying feature dimension is adopted. Important eigenvectors are taken from the original eigenvectors. Higher eigenvectors are reduced to lower eigenvectors. At last, we use fuzzy sets algorithm to identify the binding strength. The jackknife test outcomes are very good. The outcomes illustrated that the algorithm proposed in this paper is very suitable for protein classes prediction predicting RNA-protein binding complexes.