{'fraction_non_alphanumeric': 0.027416942790956807, 'fraction_numerical': 0.016303551007242765, 'mean_word_length': 4.742380872200707, 'pattern_counts': {'":': 0, '<': 1, '<?xml version=': 0, '>': 1, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
Factors affecting the determination of cerebrovascular reactivity

Background and Purpose Cerebrovascular reactivity (CVR), measures the ability of the cerebrovasculature to respond to vasoactive stimuli such as CO2. CVR is often expressed as the ratio of cerebral blood flow change to CO2 change. We examine several factors affecting this measurement: blood pressure, stimulus pattern, response analysis and subject position. Methods Step and ramp increases in CO2 were implemented in nine subjects, seated and supine. Middle cerebral artery blood flow velocity (MCAv), and mean arterial pressure (MAP) were determined breath-by-breath. Cerebrovascular conductance (MCAc) was estimated as MCAv/MAP. CVR was calculated from both the relative and absolute measures of MCAc and MCAv responses. Results MAP increased with CO2 in some subjects so that relative CVR calculated from conductance responses were less than those calculated from CVR calculated from velocity responses. CVR measured from step responses were affected by the response dynamics, and were less than those calculated from CVR measured from ramp responses. Subject position did not affect CVR. Conclusions (1) MAP increases with CO2 and acts as a confounding factor for CVR measurement; (2) CVR depends on the stimulus pattern used; (3) CVR did not differ from the sitting versus supine in these experiments; (4) CVR calculated from absolute changes of MCAv was less than that calculated from relative changes.


Introduction
Cerebrovascular reactivity (CVR) is measured as the ratio of the change in cerebral blood flow (CBF) in response to a change in a vasoactive stimulus (Willie et al. 2014). The CBF response, or its surrogate, can be estimated using transcranial Doppler (TCD) measures of flow velocity in major blood vessels (Willie et al. 2011). Alternatively, detailed maps of CBF responses can be obtained by estimating CBF using Blood Oxygen Level Dependent (BOLD) functional magnetic resonance imaging (fMRI). As discussed elsewhere, CO 2 is an ideal choice for the vasoactive stimulus (Fierstra et al. 2013). Such measurements not only inform the physiological regulation of cerebral blood flow (e.g. Willie et al. 2012), but can also be used to detect pathophysiology (e.g. Mandell et al. 2008b), and to monitor the efficacy of surgical interventions (e.g. Han et al. 2011). In this paper, we examine several factors that influence the determination of CVR.
Cerebral blood flow is affected by perfusion pressure (Panerai et al. 1999;Dineen et al. 2010;Lucas et al. 2010), metabolism (Iadecola and Nedergaard 2007;Attwell et al. 2011;Paulson et al. 2011) and CO 2 (Ainslie and Burgess 2008;Battisti-Charbonney et al. 2011). The response to CO 2 is thought to be mediated by a direct action of CO 2 on cerebral arteriolar vessels via a change in vessel wall pH to decrease cerebral flow resistance (Lassen 1968; Kontos et al. 1977;Tian et al. 1995). Similarly, pressure autoregulation also acts to control CBF by altering cerebral flow resistance, so that CO 2 and pressure autoregulation compete for the control of vessel caliber (Harper and Glass 1965).
Increasing CO 2 may also increase systemic blood pressure and in doing so increase cerebral perfusion pressure. In a recent study of subjects seated at rest Battisti- Charbonney et al. (2011) observed changes in mean arterial pressure (MAP) with increasing CO 2 . They found that below a threshold CO 2 tension, MAP changed little with CO 2 but above the threshold MAP increased linearly with ª 2014 The Authors. Brain and Behavior published by Wiley Periodicals, Inc. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. CO 2 tension. In the range of constant MAP, CBF exhibited a sigmoidal variation with CO 2 , approaching a plateau at the higher CO 2 levels. However, on further increases in CO 2 , the relationship changed and MAP and CBF increased in tandem. Thus, when CO 2 vasodilation has reached its limit, increases in perfusion pressure increase CBF passively. As we showed in these experiments, this interaction of MAP and CO 2 in controlling CBF makes it difficult to distinguish between the effects of CO 2 on vasoreactivity and those mediated by changes in perfusion pressure, either via autoregulation vasoconstriction or passive perfusion.
Cerebrovascular reactivity measurements using Doppler ultrasound may be made either sitting (Ainslie and Burgess 2008) or supine (Claassen et al. 2007), but when CBF is estimated using BOLD fMRI, the supine position is required. Since brain perfusion pressure may differ between these two positions due to gravity and changes in MAP (T-M et al. 2008), it is important to determine if CVR also differs with position. A single study using a carbogen stimulus (McDonnell et al. 2013) reported a difference in CVR measurement reliability due to body position. We therefore compared CVR measured while sitting with CVR measured when supine in these experiments.
As has been demonstrated, the stimulus pattern affects the CVR measurement (Sobczyk et al. 2014). Due to the sigmoidal nature of the vasodilatory response, the CVR measured will be affected by the range of the hypercapnic stimulus; CVR decreases with higher stimulus levels as the vasodilatory limit is reached. As we demonstrate in these experiments, CVR is also affected by the dynamic aspects of the CO 2 stimulus and the CBF response. For example, the time course of CBF response to a step increase in CO 2 varies between subjects (Regan et al. 2013) so that in some subjects the full response takes time to be reached. By contrast, a gradual ramping up of PCO 2 provides sufficient time for the CBF response to attain a steady state with respect to the PCO 2 . The effects of different stimulus patterns on CVR measurements resulting from rebreathing, breath-holding, hyperventilation, and carbogen inhalation (Totaro et al. 1999) have been studied previously. However, these stimuli all have similar slow changes and do not include fast changes in CO 2 where the dynamics of the response are important (Poulin et al. 1996) in determining CVR. Indeed, we know of no studies that have considered the effects of stimulus dynamics on the CVR measured. We therefore compared CVR calculated from step versus ramp stimulus patterns, as well as comparing CVR between fast and slow step responses.
Finally, the response analysis methods that were used affect the resulting CVR. For time-domain analyses, applying a linear or nonlinear (e.g. sigmoid) fit to the CBF responses alters the resulting CVR. We note that for these analyses, the CBF responses may be measured in absolute or relative values. We also introduce the possibility of using frequency domain analysis to calculate CVR with transfer function analysis (TFA), such as that used in analyzing dynamic pressure autoregulation . TFA provides the estimates of both the magnitude of the response to CO 2 as well as the phase relationship to the stimulus, which would reflect the speed of the response. Measuring not only the magnitude of the response but also an indication of its speed may be of clinical benefit (Conklin et al. 2010;Regan et al. 2013).
Our aim in these experiments was, therefore, to investigate how changes in MAP, and different body positions, stimulus patterns and analysis techniques affect the calculation of CVR. We used CO 2 as the stimulus and TCD measurement of the middle cerebral artery velocity (MCAv) as the response.

Subjects and ethical approval
These studies conformed to the standards set by the latest revision of the Declaration of Helsinki. Nine (4 mol/L) healthy normotensive, nonsmoking subjects of mean (SD) age 27 (4) years participated in this study after approval from the Research Ethics Board at the Toronto General Hospital (University Health Network) and written informed consent from each of the subjects. We note that our subjects were considered healthy but were not subjected to examination of the neck vessels to exclude the presence of carotid steno-occlusive disease. They were not taking any medication other than oral contraceptives, and had no history or symptoms of cardiovascular, cerebrovascular, or respiratory diseases. In addition, they abstained from caffeinated or alcoholic beverages and vigorous exercise for at least 12 h before the study.

Apparatus
Subjects were fitted with a face mask, connected to the breathing circuit via a mass flow sensor (AWM720P1 Airflow, Honeywell; Freeport, IL) to monitor ventilation. Beat-by-beat middle cerebral artery flow velocity was measured using bilateral transcranial Doppler (ST3 Transcranial Doppler, Spencer Technologies; Seattle, WA) at 2 MHz and sampled at 125 Hz. Beat-by-beat MAP and HR were determined by finger plethysmography (Nexfin, BMYE; Amsterdam, The Netherlands) sampled at 200 Hz. Tidal gas was sampled and analyzed for the partial pressures of CO 2 and O 2 (RespirAct TM , Thornhill Research Inc., Toronto, Canada), and recorded at 20 Hz. Each of these instruments saved a digital record for later analysis.

Protocol
We measured the responses of MCAv, MAP and HR to the following sequence of changes in end-tidal CO 2 tension (PETCO 2 ) while maintaining O 2 tensions at resting levels ( Fig. 1): 2 min at a baseline PETCO 2 of 40 mmHg, a step increase to 10 mmHg above baseline PETCO 2 for 5 min, a step decrease to baseline PETCO 2 and a 2 min ramp decrease from baseline PETCO 2 to 5 mmHg below baseline, a 4 min ramp increase in PETCO 2 from 5 mmHg below baseline to 10 mmHg above baseline, followed by a step decrease to baseline PETCO 2 for 2 min. Control of PETCO 2 was achieved by prospective targeting, using a sequential gas delivery (SGD) circuit and a computer-driven gas blender (RespirAct TM ; Thornhill Research Inc.); a method described by (Slessarev et al. 2007). This methodology has been shown to equilibrate arterial PCO 2 (PaCO 2 ) and PETCO 2 so that the stimulus patterns applied are those of PaCO 2 (Ito et al. 2008).
Subjects were asked to breathe in time to a metronome at a frequency of 15 b/min and empty the inspiratory bag of the SGD circuit on each breath, thereby preventing rapid changes in ventilation. All nine subjects were tested, once while seated in a comfortable chair and once while lying supine on a bed. The order of the two tests was randomized, and at least 20 min of rest occurred between the two tests. The positions were assumed at least 5 min before measurements began.

Data analysis
For each test, beat-by-beat values of MAP and HR and 4-sec averages of MCAv were time aligned with breathby-breath PETCO 2 and PETO 2 measures, and breathby-breath values for MAP, HR and MCAv were calculated as averages of the within-breath measures. Conductance MCAc was calculated as MCAv/MAP for each breath. Baseline measures were determined as the average of the 2-min initial period of the protocol. Relative breath-by-breath MCAv and MCAc measures during the tests were then expressed as percent differences from baseline. Both the breath-by-breath relative changes and the absolute changes in MCAv and MCAc with PETCO 2 were examined to calculate CVR for the step and ramp stimuli.
CVR was calculated from the step responses in two ways to take into account their dynamic aspects; (All; every hypercapnic breath) the slope of the linear regression of all breath-by-breath values of MCAv and MCAc from the start of baseline to the end of the 5-min step increase in PETCO 2 , and (SS; Steady state) the slope of the linear regression of breath-by-breath values including all baseline breaths, but only the breaths from the final 2 min of the 5-min step increase in PETCO 2 (where the final value was reached). In addition, the changes in blood pressure during the step changes of PETCO 2 were measured and classified according to whether or not a threshold increase of 10 mmHg was exceeded. Finally, the speed of the MCAv response was determined by fitting an exponential rise, and classified as slow when the time constant exceeded 5 sec and fast when less.
The ramp responses included all breath-by-breath values of MCAv and MCAc between the minimum and maximum PETCO 2 of the ramp stimulus. CVR was calculated in two ways; (Lin) the slope of the linear regression, and (Sig) the slope of the sigmoid function, a + (b/ (1 + exp(À(xÀc)/d))), fitted to the data (Levenburg-Marquard algorithm) at the baseline PETCO 2 . In addition, the changes in blood pressure during the ramp changes of PETCO 2 were examined and fitted with two linear segments above and below a threshold determined as the best fit.
Finally, we introduced the use of transfer function analysis (TFA) to calculate a TFA CVR from the gain function. Breath-by-breath step and ramp responses were selected from the recordings to obtain 500 sec samples (as indicated in Fig. 1). These were then resampled at 0.5 Hz. Transfer function analysis was based on the Welch algorithm (5 segments with 50% overlap); using Fast Fourier transforms of each nonwindowed segment were averaged to calculate gain, phase and coherence. TFA CVR was estimated from the gain function averaged between 0 and 0.03 Hz.
All of these analyses were assisted by specially written software (LabVIEW, National Instruments, Texas). CVR values calculated from both MCAv and MCAc responses and were compared (SigmaPlot 12.5, Systat Software, San Jose, CA) between various measures with repeated measure analyses of variance (rmANOVA). Where factors were found to be significant, post hoc all pairwise multiple comparisons were made using the Holm-Sidak method. The correlations between step (SS) and ramp CVR (Lin) and TFA CVR values were examined with the Pearson product moment.

General considerations
All subjects completed all tests except for subject 7 where the supine ramp response was lost due to a technical failure. Figure 1 shows example recordings from a typical test. In this subject, MCAv and MCAc closely follow the changes in PETCO 2 , and MAP varies only slightly with PETCO 2 .
The step stimuli baseline and hypercapnic portions showed little variation, with the overall mean breath-bybreath variability, expressed as standard deviation, less that 1.6 mmHg for PETCO 2 and 5.2 mmHg or less for PETO 2 . The differences in PETCO 2 and PETO 2 between adjacent breaths, expressed as the overall mean standard deviation, were also small; 1.0 mmHg or less and 2.2 mmHg or less, respectively. That there was little drift during the hypercapnic period of the step stimulus was indicated by the mean of the between breath differences, which was close to zero for both PETCO 2 and PETO 2 . We concluded that stimulus drift and variation during the step tests was minimal and could not account for the response patterns observed.
Baseline values of MAP, MCAv, and MCAc (Table 1) were tested for differences between sitting and supine positions, and although the mean values for MAP were increased and those for MCAv decreased in the seated position, they were not different. Only baseline MCAc values were different (P = 0.007; 1-way rmANOVA); higher in the supine position.

CVR determined from step increases in CO 2
Table 2 details the characteristics of the step responses in terms of the changes in MAP and the speed of the response. The latter was measured as the time constant of an exponential rise fitted to the MCAv response. Table 3 shows the CVR values calculated from the MCAv and MCAc responses.
The effect of MAP increases on the measurement of relative CVR We examined the relative CVR values to discover whether or not they differed when MAP increased using a 2-way ANOVA with factors response (MCAv vs. MCAc) and MAP increase (yes vs. no), treating all tests as independent. With such a large decrease in CVR conductance (MCAc response) when MAP increased (as illustrated in Fig. 2), we concluded that the CVR values measured during an increase in MAP were confounded such that they did not measure the vasoreactivity to CO 2 . We elaborate on this reasoning in the discussion. Consequently, further examinations were restricted to CVR values measured from MCAv responses during which MAP remained unchanged.

The effect of response dynamics on the measurement of CVR
To determine whether or not the speed of the response affected the CVR measured using the All and SS analyses, we examined the relative and absolute CVR values for differences when the response was classified as slow versus fast using a 2-way rmANOVA with factors analysis (All vs. SS) and speed of response (fast vs. slow).
The All and SS CVR values differed for slow responses (P ≤ 0.001 and 0.002 for relative and absolute CVR, respectively), but did not differ for the fast responses (P = 0.837 and 0.806 for relative and absolute CVR, respectively), as illustrated in Figure 3. The effect of position (sitting vs. supine) on the measurement of CVR We, therefore, tested position as a significant factor for only the SS MCAv responses where MAP was constant using a 2-way rmANOVA with the factors measurement type (Rel vs. Abs) and position (sitting vs. supine). Table 5 shows that although the CVR was lower in the sitting position, it was not significantly so. However, absolute CVR values were less than that of relative CVR values whether seated or supine.

CVR determined from ramp increases in CO 2
The MCAv responses were fitted with either a straight line or a sigmoid as illustrated in Figure 4A and B; with the slope of the straight line taken as the Lin CVR and the slope of a tangent to the sigmoid curve at the baseline PETCO 2 as the Sig CVR. We examined the changes in MAP during the ramp increase in CO 2 by fitting two linear segments above and below a threshold where the slope changed abruptly. Figure 4C and D illustrates the effect and shows that the MCAv and MCAc responses diverged markedly above the threshold PETCO 2 where MAP began to increase. Ramp tests where the sub-threshold slope was > 0.6 mmHg/mmHg and the threshold < 46 mmHg were eliminated from further analysis as confounded by the concurrent increase in MAP. Table 6 records the CVR values calculated for ramp MCAv response to CO 2 where MAP was constant.
The effect of position and fitting function on the measurement of CVR These CVR measures were examined to determine if the linear and sigmoid fitting of the responses produced different CVR values, and to see if position was a significant factor using a 2-way rmANOVA with factors analysis (linear vs. sigmoid) and position (sitting vs. supine). Table 7 shows that the linear and sigmoidal analyses produced CVR values that were not different (P = 0.153 and 0.198 for relative and absolute values, respectively). Furthermore, position was not a significant factor despite the finding of a decreased CVR in the sitting position (P = 0.697 and 0.490 for relative and absolute values, respectively). A 1-way rmANOVA comparison of the sitting vs. supine sigmoidal characteristics also found no difference between sitting and supine tests.

Comparing CVR from step and ramp stimuli
We compared the CVR values obtained from the linear analysis of the ramp MCAv responses with their corresponding CVR values obtained from the SS analysis of the step MCAv responses (tests where MAP was not a factor) using a 2-way rmANOVA with factors test stimulus type (step vs. ramp) and relative (Rel, %/mmHg) versus absolute (Abs, cm/s/mmHg) units. Table 8 shows that the step CVR values were smaller than the ramp CVR values regardless of whether in relative or absolute units, and that the absolute CVR values were smaller than the relative CVR values regardless of the stimulus pattern.
Baseline PETCO 2 and the PETCO 2 of maximum CVR Finally, the sigmoidal fitting of the responses also provided a measure of the PETCO 2 at which the sigmoidal response slope was the highest (the midpoint parameter). A 1-way rmANOVA analysis showed that the midpoints of the sigmoid functions fitted to the relative MCAv responses (mean [SD] = 42.5 [2.6] mmHg) were not different from those of the absolute responses (mean [SD] = 41.7 [3] mmHg), but both were higher than the baseline PETCO 2 of these selected tests (mean [SD] = 39.9 [0.8] mmHg). The baseline PETCO 2 chosen for these experiments was, therefore, slightly lower than the PETCO 2 where CVR is a maximum and the cerebrovasculature midway between its limits of vasoconstriction and vasodilation.

CVR determined from transfer function analysis
We examined the ramp and step MCAv (cm/s/mmHg) responses where MAP was not a confounding factor with transfer function analysis. Figure 5 shows the ensemble averages for Gain, Phase, and Coherence. Figure 6 shows the relation between CVR calculated from the linear fit to  the ramp responses and from the steady-state step responses versus TFA CVR. The Pearson product moment correlation coefficients were 0.942 and 0.892 for the ramp and step tests, respectively. We noted that the phase reflected the speed of the response; the mean (SD) phase of 6 step responses  classified as slow or oscillatory was À0.27 (0.15) radians compared to 0.01 (0.05) radians for the fast responses.

General
These experiments were undertaken with a view to examining some factors that could affect the measurement of CVR. We use the term CVR in the sense of a vascular response to CO 2 , i.e. vascular diameter changes. It is this aspect that assumes clinical importance in defining the ability of a vascular bed to adjust its flow resistance to cope with challenges to its blood flow supply. Such cerebrovascular reactivity measurements to assess cerebrovascular health have important clinical applications. Impaired vascular reactivity has been linked to an increased risk of stroke (Kleiser and Widder 1992;Yonas et al. 1993;Webster et al. 1995;Molina et al. 1999;Markus and Cullinane 2001;Ogasawara et al. 2002;Sasoh et al. 2003), and indeed, areas of reduced cerebral reactivity, such that steal occurs during hypercapnia, are those where leukoaraiosis occurs. Cortical thinning results in areas of poor vascular reactivity , and in their recent review Marshall and Lazar (2011) suggest that cognitive impairment may be independently mediated by hemodynamic dysfunction. There is evidence for an association between cognitive dysfunction and hemodynamics impairment due to carotid stenosis (Balucani et al. 2012;Balestrini et al. 2013), and alterations of cerebral vessel functional and anatomic status have been shown with dementia (Marshall and Lazar 2011;Silvestrini et al. 2011), and to increase the risk of conversion from mild cognitive impairment to dementia . We used step and ramp stimulus patterns to obtain the CVR values that are in common use so as to highlight the possible pitfalls involved in measuring CVR, and introduced an alternative method of calculating CVR using transfer function analysis. We suggest that the most serious pitfall is ignoring blood pressure increases with CO 2 . Indeed, we recommend that tests with such increases in blood pressure be discarded as measures of the vascular diameter changes with CO 2 for reasons which we discuss below. The second aspect of CVR measurement often neglected is the effect of the stimulus and response patterns on CVR; these must be taken into consideration when choosing the analysis of the blood flow responses. Finally, although we suspected that body position might affect the CVR, we nevertheless found that in these experiments it did not. These aspects of CVR measurement are discussed in detail in the following sections.

Blood pressure
In tests where MAP increases with CO 2 , the question arises as to whether the blood flow measurement can be used to correctly assess the vasoactive response to CO 2 . Some authors suggest that measuring the response in terms of MCAc eliminates the confounding effect of changes in perfusion pressure e.g. (Claassen et al. 2007;Willie et al. 2012). Alternatively, CVR can be taken to include any changes due to MAP, and thereby represent the CBF response that would be observed for environmental hypercapnia such as occurring in obstructive sleep apnea or as adaptation to altitude (Fan et al. 2014). However, we argue that if CVR is used to assess vascular reactivity in terms of vessel flow resistance, for example, to detect pathophysiology (Mandell et al. 2008b;Sobczyk et al. 2014), then increases in perfusion pressure during the test are a confounding factor.
It is likely that cerebral perfusion pressure increases when MAP increases. In that case, CBF is determined by a number of concurrently operating factors as follows: (1) CO 2 vasodilation; (2) pressure autoregulation vasconstriction; (3) physical pressure vasodilation; (4) physical passive pressure flow increase. Pressure autoregulation vasoconstriction and CO 2 vasodilation interact since both adjust vessel diameter, so that if autoregulation is not exhausted, then any increase in perfusion pressure invokes autoregulation adjustment of cerebrovascular conductance to regulate cerebral blood flow (Baumbach and Heistad 1983). Even if autoregulation is exhausted, CBF increases not only due to the vasodilatory effect of CO 2 but also due to the direct effect of perfusion pressure on flow (Battisti-Charbonney et al. 2011).
In none of these circumstances is it possible to separate the effects of perfusion pressure and CO 2 -induced vasodilation on cerebral blood flow. While MCAc in these experiments does provide an estimate of the conductance response to CO 2 due to the various factors involved, it does not estimate the vasodilatory effect of CO 2 , and so using the MCAc response to measure CVR is misleading. We concluded that increases in MAP with CO 2 remain a confounding factor when measuring CVR, and consequently responses where MAP increased were excluded from further analysis in this study. We note that blood pressure increases with CO 2 that confound cerebral blood flow responses to CO 2 are routinely disregarded in experiments such as breath-holding (e.g. Bright and Murphy 2013) despite possible confounding increases in MAP (Przybylowski et al. 2003), which may be substantial (Cummings et al. 2007). Similarly, MAP increases with increasing CO 2 produced by rebreathing (Vovk et al. 2002;Claassen et al. 2007;Battisti-Charbonney et al. 2011) or CO 2 inhalation (Hetzel et al. 1999;Valdueza et al. 1999) are often ignored (e.g. Thomas et al. 2013) when measuring CVR. We suggest that blood pressure be monitored during CVR testing and those tests where MAP increases be rejected if using CBF to assess the vasoactive response to CO 2 . These tests measure the CBF response to CO 2 not the reactivity of the cerebral vasculature.
We also noted the changes in HR for those subjects that increased MAP in response to CO 2 . For the step stimulus, the HR response was mixed, with one subject increasing HR as MAP increased (subject 4 sitting and supine) and other subjects decreasing HR (subjects 1 sitting, and 7 sitting and supine). The subjects with MAP increases with CO 2 during ramp stimuli and showed no discernible concurrent changes in HR. Although these changes in heart rate may indicate changes in sympathetic and parasympathetic tone , there is insufficient information in these experiments to make a definitive interpretation.
Step versus ramp We measured CVR using both a step increase in PETCO 2 and a ramp increase; the ramp stimulus providing a slow change in CO 2 in contrast to the rapid increase of the step stimulus. Several characteristics of these stimuli affect the CBF response. First, since the CBF response to CO 2 is sigmoidal (Battisti-Charbonney et al. 2011), both the range and starting PETCO 2 determine the CBF response (Sobczyk et al. 2014). A stimulus that impinges on the upper or lower limits will necessarily produce an attenuated response and lower CVR. Indeed, we attribute the lower CVR measured for the step stimulus compared to that measured for the ramp stimulus due to that effect. The ramp stimulus range included both hypocapnic and hypercapnic PETCO 2 , so that it bracketed resting PETCO 2 where CVR is maximum, whereas the step stimulus was limited to the hypercapnic range.
The ramp stimulus range in these experiments, where PETCO 2 varied from approximately 35 to 50 mmHg, was less than that used in our previous rebreathing experiments, where PETCO 2 ranged from 25 to 55 mmHg (Battisti-Charbonney et al. 2011). With such a limited stimulus range, the response appeared to be within the linear portion of the response in most tests. However, in some ramp tests, the response showed a degree of limitation at the minimum or maximum stimulus levels such that the sigmoidal fit appeared more appropriate than a linear fit as illustrated in Figure 4B. Nevertheless, we found that Lin and Sig CVR measures were similar in these experiments, and concluded that with a limited stimulus range, both linear and sigmoidal fitting to ramp responses can be used to determine CVR. We note however, that the sigmoidal analysis provides additional information (the upper and lower limits of vasodilation and constriction, the linear range and the PCO 2 at which CVR is maximum) and should be used when the stimulus range is large.
The rapid changes in PETCO 2 produced by the step stimulus elicited responses that revealed their dynamic aspects; in these experiments, we were able to discern slow and fast responses as well as two oscillatory responses as previously observed (Regan et al. 2013). As our analysis showed, the CVR values calculated using all of the hypercapnic response were less than the CVR values calculated using the later steady-state section of the hypercapnic response for slow responses. This low CVR value may be useful for discriminating a pathophysiology involving slow cerebrovascular dynamics, and is often used in the calculation of CVR maps using BOLD MRI (e.g. Mandell et al. 2008a).
The decision to use a step or ramp stimulus therefore involves consideration of the advantages and disadvantages of each, and the previous results and discussion enables such an enumeration. If the dynamics of the response are an important aspect of the CVR measurement, then we suggest choosing the step stimulus, and the appropriate portion of the response used for analysis. For example, CVR determined for slow responses analyzed using all of the response was less than CVR calculated from the steady-state portion of the response, and also less than CVR calculated from a ramp response. This low CVR value may be useful for discriminating a pathophysiology involving slowed cerebrovascular dynamics.
The main disadvantage of the step stimulus is that only two points on the entire response are measured so the portion of the sigmoidal response that is measured is unknown. For example, CVR measured with a stimulus range that includes the upper limits of the sigmoidal response will be less than CVR measured with a stimulus range that includes the midrange of the sigmoidal response. This disadvantage of the step stimulus is overcome by using a ramp stimulus so that the sigmoidal nature of the response can be observed and the linear portion identified. However, the ramp response does not examine the response dynamics. There is a final aspect contrasting step and ramp stimuli, that of subject tolerance. In our experience, the ramp response with its slow increase in hypercapnia and short exposure to the peak stimulus is better tolerated than the rapid step increase in hypercapnia whose peak is maintained longer.

Relative versus absolute measures of CVR
In these experiments, the baseline MCAv did not differ between the various conditions (sitting vs. supine) and the ramp and step stimuli. Therefore, the statistical test results between relative and absolute CVR measures did not differ. However, in cases where the baseline CBF values differ between conditions, the choice between relative and absolute CVR measures may affect the statistical test outcome, since changes in baseline CBF inversely affect the relative CVR.

Transfer function analysis
In these experiments, we introduced the use of transfer function analysis to calculate CVR, limiting the analysis to the ramp and step responses where MAP was constant. The TFA CVR values were similar to those calculated from the linear fits to the ramp responses and the steadystate step responses, and well correlated. Moreover, the phase values correlated with the speed of response determined from exponential fitting. We therefore concluded that TFA analysis deserves further investigation, and in particular we suggest that TFA analysis may be useful in BOLD MRI mapping of CVR, where the phase response could indicate areas of slowed responsiveness.

Conclusions
These experiments, using MCAv as a surrogate for CBF and CO 2 as a stimulus, led to several conclusions bearing on the measurement of CVR. First, if the measurements of CVR are to be used as an indication of cerebrovascular vasodilatory reactivity, then MAP must be monitored, and CVR should be calculated from the change in MCAv while MAP remains constant to avoid the confounding action of changes in MAP with CO 2 . Second, when CVR is measured from the responses to a step stimulus pattern from baseline to hypercapnia, it is important to observe the dynamics of the response and use an analysis appropriate to the study aim. Third, if the ramp stimulus range is limited, then CVR values calculated from linear regression are equivalent to those calculated from fitting a sigmoidal function to the response, but the sigmoidal function parameters offer additional information. Fourth, transfer function analysis to calculate CVR appears to be a technique worthy of further investigation. Fifth, the subject position, sitting or supine did not alter the CVR. Finally, CVR calculated from relative responses differ from those calculated from absolute responses, but did not alter the statistical test results in these experiments.