{'fraction_non_alphanumeric': 0.03590260285474391, 'fraction_numerical': 0.029319899244332495, 'mean_word_length': 5.040981943599108, 'pattern_counts': {'":': 0, '<': 0, '<?xml version=': 0, '>': 0, 'https://': 0, 'lorem ipsum': 0, 'www.': 1, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
D-Glucuronyl C5-epimerase suppresses small-cell lung cancer cell proliferation in vitro and tumour growth in vivo

Background: D-Glucuronyl C5-epimerase (GLCE) is a key enzyme involved in the biosynthesis of heparan sulphate proteoglycans, which has an important role in cell–cell and cell–matrix interactions and signalling. Decreased GLCE expression in human breast tumours and its anti-proliferative effects in breast cancer cells suggest that it may be a candidate tumour-suppressor gene. The aim of this study was to investigate the involvement of GLCE in lung carcinogenesis. Methods: D-Glucuronyl C5-epimerase expression in different lung cancer cell lines was determined and the gene was ectopically re-expressed in U2020 small-cell lung cancer cells. Cellular proliferation in vitro and tumour growth in vivo were then examined. Results: Ectopic re-expression of GLCE in U2020 cells did not affect cell viability but did influence morphology. Cellular proliferation in vitro and tumour formation in vivo were both suppressed. These effects were mediated via downregulation of several pro-angiogenic growth factors and their receptors, including VEGF-A, TGFB1, FGFR2, PDGF-A and PDGF-B, and TNFa and its receptors. Expression of matrix metalloproteinase2, MTA1, PLAU, TIMP3, S100A4, SERPINE1 and TWIST1 was also downregulated. Conclusion: The anti-tumour effects associated with ectopic GLCE re-expression suggest that it may be a potential tumour-suppressor gene and a possible target for lung cancer diagnosis and treatment.

Lung cancer is one of the most common cancers worldwide in terms of both incidence and mortality, with 1.35 million new cases and 1.18 million deaths per year. Numerous attempts have been made to find reliable molecular markers and possible new targets to treat the disease (Hann and Rudin, 2007); however, despite extensive studies, the molecular mechanisms underlying lung carcinogenesis remain unclear (Rosti et al, 2006;Pastorino, 2010).
The aim of the present study was to examine the possible involvement of D-glucuronyl C5-epimerase (GLCE) in the development of lung cancer. D-Glucuronyl C5-epimerase is one of the key enzymes involved in the biosynthesis of heparan sulphate (HS): the polysaccharide moiety of complex HS proteoglycan (HSPG) molecules. Heparan sulphate proteoglycans are widely expressed on cell surfaces and within the extracellular matrix (ECM). They have important roles in cell -cell and cell -matrix interactions and signalling through their interactions with various proteins, including growth factors and their receptors (Ori et al, 2008). The most common HSPGs are syndecans (Alexopoulou et al, 2007), glypicans (Filmus et al, 2008), perlecan (Whitelock et al, 2008), collagen XVIII and agrin (Iozzo, 2005). Abnormal expression or dysregulated function of HSPGs is involved in cancer and angiogenesis, and is crucial for the evolution of the tumour microenvironment .
At present, the functional contribution of glycosylation (particularly proteoglycans) to lung carcinogenesis is unclear; although the pattern of HSPG expression is significantly altered in lung tumours and may contribute to their invasive phenotype (Nackaerts et al, 1997), and the expression of the candidate tumour-suppressor gene, glypican-3, is absent in all the non-smallcell lung carcinoma cell lines tested to date (Kim et al, 2003). However, because there are few reliable and sensitive methods available for investigating the role of glycosylation, the majority of studies have only looked at the HSPG protein core. Nevertheless, in many cases, glycosylation is a major determinant of HSPG function (Blackhall et al, 2001;Reijmers et al, 2010). An alternative approach to the problem could be to study the biosynthetic machinery for HS, as defects in biosynthesis would, presumably, affect all HSPGs (Lander and Selleck, 2000).
Little is known about the functional role of HS biosynthetic enzymes in carcinogenesis, and GLCE is the least studied of all the enzymes (Nadanaka and Kitagawa, 2008). D-Glucuronyl C5-epimerase is responsible for the epimerisation of D-glucuronic acid (D-GlcUA) to form L-iduronic acid (L-IdoUA), which provides flexibility to the HS chains and is important for their interactions with various growth factors (Catlow et al, 2008;Jia et al, 2009). D-Glucuronyl C5-epimerase has been cloned from bovine lung cDNA (Li et al, 1997), murine liver (Li et al, 2001) and mouse mastocytoma cell line cDNA libraries (Crawford et al, 2001). Murine (NM_033320), bovine (NM_174070) and human (NM_015554) epimerase cDNAs are 82 -86% homologous at the nucleotide level and 96 -99% homologous at the amino-acid level. Chromosome mapping suggests the occurrence of a single epimerase gene on chromosome 15q23 (Li et al, 2001). The involvement of GLCE in the aetiology and pathology of human disease is not known.
Recent studies show decreased expression of GLCE in human breast tumours (Eshchenko et al, 2007;Grigorieva et al, 2008). Ectopic expression of GLCE inhibits the proliferation of MCF7 cells in vitro through attenuated expression of the different genes involved in cell cycle regulation, angiogenesis and metastasis . These data support the involvement of the gene in breast carcinogenesis.
According to the data presented at http://www.genecards.org/ cgi-bin/carddisp.pl?gene ¼ GLCE&search ¼ GLCE, another tissue showing relatively high GLCE expression is human lung. Targeted disruption of the GLCE gene in mice results in structurally altered HS, which lacks IdoA and carries a lethal phenotype resulting in lung defects, renal agenesis and skeletal malformations (Li et al, 2003). These data suggest that appropriate GLCE expression/ activity is particularly important in lung tissues; thus, we hypothesised that dysregulation of GLCE expression in human lung tissue may be a significant factor in the aetiology and/or development of malignancy.
In this study, we investigated the expression levels of GLCE in different lung cancer cell lines and ectopically expressed GLCE in the small-cell lung cancer cell line, U2020. The proliferation rates of the cells in vitro and tumour growth in vivo were studied, as well as the possible molecular mechanisms of the functional effect of GLCE in lung cancer.

Cell lines and cell culture
The U2020, A549, H157 and H647 human lung cancer cell lines were obtained from MTC (Karolinska Institute, Stockholm, Sweden). The A716 cell line was a kind gift from Professor M Lerman (Center for Cancer Research, National Cancer Institute, Frederick, MD, USA). All cell lines were maintained in Iscove's Modified Dulbecco's medium (IMDM) supplemented with L-glutamine, 100 units ml À1 penicillin, 100 mg ml À1 streptomycin and 10% FBS at 37 1C in a humidified 5% CO 2 incubator. Cells were harvested for passaging or analysis using trypsin/EDTA.

Analyses of GLCE expression using RT -PCR
Total RNA was extracted from the cells using the PureLink Total RNA Purification System (Invitrogen, Carlsbad, CA, USA) according to the manufacturer's instructions. cDNA was synthesised from 1-2 mg of total RNA using a First Strand cDNA Synthesis kit (Fermentas, Hanover, MD, USA) and 1/10th of the product was subjected to PCR analysis.

Construction of the epimerase-expression plasmid
Human GLCE (NM_015554) was cloned into the episomal vector, pETE/Bsd (Protopopov et al, 2002). The full-length GLCE cDNA sequence was amplified from the KIAA0836 clone (AB_020643) encoding the 5 0 -truncated sequence of GLCE (Kazusa DNA Research Institute, Chiba, Japan) by PCR using Pfu-DNApolymerase (Stratagene, La Jolla, CA, USA) and the epi-oligo-F 5 0 -CTAAGATCTAGATATGCGTTGCTTGGCAGCTCGGGTCAACT ATAAGACTTTGATTATTA-3 0 and epi-R 5 0 -TACAGCGGCCGCT GAAGTGCAGTTTTGGT-3 0 primers. The amplified full-length DNA fragment was then cloned into the pETE/Bsd vector at the BglII and NotI sites. The GLCE sequence was verified by sequencing (Dye Terminator Cycle sequencing Kit and an ABI PRISM 3700 Genetic Analyzer, Applied Biosystems, Foster City, CA, USA).

Transfection and selection of stably transfected epi-U2020 cell clones
To obtain stable cell clones expressing GLCE, U2020 cells were transfected with epi-pETE/Bsd or pETE/Bsd plasmid DNA (0.5 mg DNA per well) in 12-well plates using Lipofectamine and Plus Reagent (Invitrogen) according to the manufacturer's protocol. Transiently transfected epi-U2020 and pETE-U2020 cells were cultured for 2 -3 weeks in IMDM medium containing Bsd (5 mg ml À1 ) to select stable clones.

Immunocytochemistry
For immunofluorescence, cells were grown on glass coverslips and then fixed with 4% formaldehyde. The anti-GLCE custom rabbit polyclonal serum (GenScript Corporation, Piscataway, NJ, USA) was used for immunostaining. Staining patterns were visualised with TexasRed-conjugated antibody against rabbit IgGs (Vector Laboratories, Burlingame, CA, USA) (1 : 1000 dilution). The nuclei were mounted and counterstained with DAPI using SlowFade Gold with DAPI mounting medium (Invitrogen) and observed by fluorescent microscopy (Axio Imager, Carl Zeiss UK, Hertfordshire, UK).

Colony formation assay
Transiently transfected cells were stripped 24 -48 h after transfection and plated on 100 mm 2 cell culture dishes at a density of 500-1000 cells per plate. After selection with Bsd (5 mg ml À1 ), Giemsa-stained colonies were photographed and counted using Quantity One software (version 4.4.0; Bio-Rad, Hercules, CA, USA).

Growth curve assay
The growth curves for the U2020 cells transiently transfected with epi-pETE/Bsd or pETE/Bsd plasmid DNA were monitored by direct cell counting. The cells were seeded at 10 4 cells per well in 6-well plates 24 h after transfection, detached using 0.25% trypsin every 24 h and counted using a Coulter Counter (Beckman Coulter, Brea, CA, USA).

In vitro cell proliferation assay
Cell proliferation rate was determined using the CyQUANT NF Cell Proliferation Assay (Invitrogen) according to the manufacturer's protocol. Briefly, cells were plated in a 96-well microplate at densities of 100 -500 per well (8 -12 identical wells in total) and the DNA content of the wells was measured every 24 h. This was achieved by removing the medium and adding 50 ml of fluorescent dye followed by incubation for 30 min at 37 1C. The fluorescence intensity of each sample was measured at 485/530 nm using fluorescence microplate reader (SPECTRA max, Molecular Devices, Sunnyvale, CA, USA).

Tumour growth in SCID mice
The tumourigenicity of epimerase-transfected U2020 and control pETE-U2020 cells was assessed by subcutaneously injecting the cells into 6 -8-week-old SCID mice as previously described (Protopopov et al, 2002). Cell inoculation, monitoring of tumour growth and animal care were undertaken at the Karolinska Institute Animal House according to the Institutional guidelines. Briefly, cells were collected by centrifugation at 800 r.p.m. for 2 min and resuspended in serum-free IMDM medium at a concentration 2-3 Â 10 6 cells per 100 ml injection. The cells were inoculated together with a Matrigel matrix (BD Biosciences, Erembodegem, Belgium) according to the manufacturer's protocol. Mice were observed for tumour formation twice per week and the tumour size was measured using callipers.

Cancer PathFinder RT2 Profiler PCR array
The Cancer PathFinder RT2 Profiler PCR array (SABioscience, Frederick, MD, USA) was used to identify the molecular mechanisms underlying the anti-proliferative effects of GLCE. Briefly, total RNA was isolated using a RNAqueous Micro Kit (Applied Biosystems). The RNA concentration was determined using a Quant-iT Assay Kit for RNA quantification (Invitrogen) and was verified by electrophoresis. cDNA was synthesised from 1-2 mg of total RNA using a First Strand cDNA Synthesis kit (Fermentas). Real-Time PCR was performed using an RT2 Profiler PCR Array System with SYBR Green PCR Master Mix (Fermentas) and an iCycler iQ5 Multicolor Detection System (Bio-Rad) according to the manufacturer's instructions. All data were analysed using Excel-based PCR Array Data Analysis Software (SABioscience). This integrated web-based software package automatically calculates ddCt-based fold changes in genes expression from the uploaded raw threshold cycle data. Each replicate cycle threshold (Ct) was normalised to the average Ct of five endogenous controls (B2M, HPRT1, RPL13A, GAPDH and ACTB) on a per plate basis.

D-Glucuronyl C5-epimerase expression is decreased in lung cancer cells
Multiplex and quantitative RT -PCR analysis was used to study GLCE expression in lung cancer cells. Specific primers and TaqMan probes for the exon 2 -3 boundary region of the GLCE gene (which appears to be affected in human tumours) were used (Grigorieva et al, 2008). D-Glucuronyl C5-epimerase expression was examined in U2020 (small-cell lung carcinoma), A716, A549, H647 and H157 (non-small-cell lung cancer) cells. Normal human lung cDNA (Clontech, San Diego, CA, USA) was used as a control for epimerase expression in normal lung tissues ( Figures 1A and B).
According to the multiplex RT -PCR data, the GLCE expression levels in all of the tested cell lines was three to four times lower than in normal lung tissue ( Figure 1A). The effect was quantified using TaqMan-based qRT -PCR, and GLCE expression was determined to be 1100 -1200 epimerase molecules per 1000 actin molecules in normal lung tissue and 100 -200 epimerase molecules per 1000 actin molecules in the lung cancer cell lines ( Figure 1B). These results clearly show that GLCE expression is significantly decreased (five to six times) in lung cancer cell lines compared with normal human lung tissues.
D-Glucuronyl C5-epimerase re-expression suppresses U2020 cell proliferation but not viability in vitro To study the functional role of GLCE in lung cancer, the gene was ectopically expressed in U2020 cells. As a first step, full-length GLCE cDNA was cloned into the episomal vector pETE/Bsd for the effective ectopic expression of GLCE in mammalian cells. The obtained DNA plasmid was designated as epi-pETE/Bsd. U2020 cells were transiently transfected with either epi-pETE/Bsd (epi-U2020) or an empty pETE/Bsd control vector (pETE-U2020) and subjected to colony formation assay and growth curve assay ( Figure 2).
Colony formation was evaluated in monolayer cultures. The number of colonies formed by the epi-U2020 cells was similar to that formed by the control pETE-U2020 cells (Figures 2A and B). However, there was a significant difference in growth time between the epi-U2020 and the pETE-U2020 clones (6 weeks and 2 weeks between transfection and plate staining, respectively). To investigate the possible reasons for this difference, the proliferation of U2020 cells transiently transfected with either the epi-pETE/Bsd or the control pETE/Bsd plasmids was estimated using a growth curve assay ( Figure 2C). The results showed that transfection with the epi-pETE/Bsd plasmid impaired U2020 cell proliferation compared with the control pETE-U2020 cells.
To further study the anti-proliferative effects of GLCE in U2020 cells, stable epi-U2020 and pETE-U2020 clones were selected. These clones were checked for GLCE expression using multiplex RT -PCR and the clones with the highest epimerase expression (clones 4, 7 and 8) were used for the subsequent experiments ( Figures 3A and B).
The restored epimerase mRNA levels in the stable epi-U2020 clones were significantly higher than those in the control pETE-U2020 clones, and were very similar to those in normal human lung tissue. The presence of GLCE protein in the epi-U2020 cells was verified by immunocytochemical staining using a custom anti-epimerase polyclonal antibody ( Figure 3D). Interestingly, the stable epi-U2020 clones were morphologically different from the control pETE-U2020 clones ( Figure 3C), whereas the control clones showed the same morphology as the original U2020 cells.
The proliferation rate of the stable epi-pETE and pETE-U2020 clones was determined using the CyQUANT NF Cell Proliferation Assay based on the cellular DNA content measured by binding of the fluorescent CyQUANT GR dye ( Figure 3E). The stable epi-U2020 clones (4, 7 and 8) proliferated five to six times more slowly than the control pETE-U2020 cells. These results showed that the selected stable epi-U2020 clones expressed GLCE at levels similar to that in normal human lung tissue, and that ectopic re-expression of GLCE in U2020 cells did not change their viability, but did affect their morphology and proliferation rate in vitro.

D-Glucuronyl C5-epimerase inhibits U2020 tumour xenograft growth in vivo
Epimerase-expressing U2020 cells (clones 4, 7 and 8) were inoculated into SCID mice to study the effects of GLCE on the growth of experimental lung tumours in vivo. U2020 cells stably transfected with an empty vector (pETE-U2020) were used as a control. Almost all the xenograft tumours grew more slowly than the control tumours ( Figure 4A), or failed to grow at all. Over the course of 31 -35 days, solid tumours were detected in 5 of 6 mice inoculated with pETE-U2020 cells (control tumours), but in only 5 of 10 mice inoculated with epi-U2020 cells. All the tumours (including the controls) were explanted and epimerase expression determined using multiplex RT -PCR and qRT -PCR ( Figures 4B  and C). The grown epi-U2020 xenograft tumours showed almost no epimerase expression, although the epi-U2020 cells used for the initial injections did show ectopic epimerase expression at levels similar to those in normal lung tissue ( Figures 4B and C). qRT -PCR confirmed the multiplex RT -PCR data, estimating GLCE expression in the initial epi-U2020 cells to be 720 -960 epimerase molecules per 1000 GAPDH molecules, and almost no epimerase expression in the grown epi-U2020 xenograft tumours. Interestingly, slow-growing xenografts showed higher epimerase expression (similar to that of the initial epi-U2020 cells; Figures 4B and C), indicating that epimerase inactivation in the growing experimental tumours may have been necessary for cancer progression.
These results show that GLCE expression in U2020 cells inhibits the growth of U2020 xenograft tumours in SCID mice and suggests that GLCE may be a potential, novel tumour-suppressor gene.

D-Glucuronyl C5-epimerase affects lung cancer cell proliferation and tumour growth by inhibiting tumour angiogenesis and invasion/metastasis pathways
To further elucidate the molecular mechanisms underlying the anti-proliferative effects of GLCE in small-cell lung cancer, we used the Cancer PathFinder RT Profiler PCR Array. This new highthroughput tool allows researchers to simultaneously profile the expression of a panel of 84 cancer-related genes involved in 6 different molecular pathways and combines the quantitative performance of SYBR Green-based RT -PCR with the multiple gene-profiling capabilities of a microarray. The relative expression levels of each gene in the two samples are plotted against each other in a Scatter Plot (sample 1/control sample) and pair-wise comparison yields a fold change in the expression of the genes being studied.
We performed this analysis to look for genes whose expression was changed in epimerase-expressing U2020 cells compared with control pETE-U2020 cells. The results showed that the expression of 32 genes was either down-or upregulated by more than two-fold, while the expression of the remaining 52 genes was unaffected ( Figure 5).
According to the Cancer PathFinder RT Profiler PCR Array, most of the affected genes are involved in apoptosis, angiogenesis and invasion/metastasis pathways.
Reduced growth factor expression, in combination with altered expression of key adhesion molecules (ITGA3, MCAM, collagen XVIII) may affect the adhesion, intercellular contacts and signalling in epi-U2020 cells, thereby creating a more physiologically 'normal' microenvironment and restoring contact inhibition of cell proliferation.
Taken together, these results show decreased GLCE expression in lung cancer cell lines compared with the normal lung tissue. Ectopic expression of GLCE in U2020 cells did not affect cell viability, but did suppress cell proliferation in vitro and the growth of experimental U2020 xenograft tumours in vivo. The in vitro and in vivo results from the Cancer PathFinder Array suggest that the anti-proliferative and anti-tumourigenic effects of GLCE in human small-cell lung cancer cells are mediated via downregulation of key growth factors and their receptors (particularly those involved in angiogenesis).

DISCUSSION
The results of the present study show that GLCE suppressed the proliferation of lung cancer cells in vitro, inhibited xenograft tumour formation in vivo and GLCE inactivation was necessary for the growth of experimental tumours in vivo. As shown previously (Li et al, 1999), this is a strong evidence for a tumour-suppressor function of GLCE in lung cancer.
A similar effect was shown previously for other HS-synthesising enzymes, EXT1/EXT2, which are responsible for the polymerisation of the disaccharide-repeating regions within the growing HS chains (Lind et al, 1998). EXT1 expression is silenced in human cancer cells by epigenetic inactivation, and re-expression of EXT1 leads to the resumption of HS biosynthesis, reduced colony formation density and tumour growth in nude mice (Ropero et al, 2004). Unexpectedly, targeted deletion of EXT1 does not lead to a complete lack of HS synthesis. Indeed, two distinct cell lines defective in EXT1 expression produce a small, but significant, amount of HS chains (Okada et al, 2010), probably due to the contribution of other EXT gene family proteins (Kim et al, 2001).
D-Glucuronyl C5-epimerase is a single-copy gene working downstream of EXT1/EXT2 during HS biosynthesis. Epimerase knock-out mice show a lethal phenotype with lung and kidney defects (Li et al, 2003), suggesting the crucial importance of the gene in lung and kidney development. The results of the present study support an involvement of GLCE in lung carcinogenesis, and show that the gene is a second candidate tumour-suppressor gene related to the HS biosynthetic machinery along with EXT1.
According to the PathFinder Array results, three molecular pathways were mainly affected by ectopic GLCE expression in U2020 cells: apoptosis, angiogenesis and invasion/metastasis. With regard to apoptosis, the main changes involved decreased expression of TNF and TNF receptors (by 3 -4-fold), which are involved in the early stages of apoptosis signalling/initiation. Taking into account the fact that expression of the main components of the intracellular apoptotic machinery (BCL2, BAD, BAX, CASP8, GZMA) remained unchanged and the viability of epi-U2020 cells was not affected by ectopic expression of epimerase, we suppose that the TNF/TNF receptors have a nonapoptotic function in these cells. It may be that, in this case, the TNF/TNF receptors functioned mainly in angiogenesis-related events, and that the anti-mitotic effects of GLCE in U2020 cancer cells were not directly related to apoptosis.
Regarding angiogenesis, the main changes involved decreased expression of the pro-angiogenic growth factors, VEGF-A, PDGF-A, PDGF-B, FGFR2, TGFB1 and TNF. Most of these factors are upregulated in cancers. In particular, high expression of VEGF has been observed in many cancers and is associated with a poor prognosis (Azam et al, 2010). For example, VEGF expression increases as bronchial carcinoma progresses (Merrick et al, 2005) and is significantly increased in lung carcinomas (Brueckl et al, 2008). Over-expression of PDGF is linked to different types of malignancy (Appelmann et al, 2010). FGFR2 expression is significantly increased in cancer tissues (Marzioni et al, 2009) and aberrant activation of FGFR2 signalling induces the proliferation and survival of tumour cells (Katoh and Katoh, 2009). TGF-b, a tumour suppressor in normal or dysplastic cells, becomes a tumour promoter in advanced cancers (Nagaraj and Datta, 2010). Thus, the angiogenic growth factor 'cocktail' in cancers may be biased towards VEGF and assorted other factors like PDGF, FGF, EGF-like factors, angiopoietins (ANG1 and ANG2) or cytokines such as IL8 (Schulz, 2005).
Ectopic expression of GLCE significantly decreased VEGF-A expression (by 6.2-fold), as well as that of PDGF-A, PDGF-B and FGFR-2, while the expression of other pro-angiogenic genes (ANG1, ANG2 and IL8) remained unaffected. It is possible that GLCE re-balances the growth factor 'cocktail' in favour of tumour angiogenesis inhibition. If this is the case, then GLCE may be a novel, natural regulator of angiogenesis and a possible target for anticancer therapy.
The mechanism by which increased GLCE expression affects growth factor expression and angiogenesis may act via changes in the structure of cell surface and ECM proteoglycans. Many HSPGs are involved in angiogenesis, including syndecans (Alexopoulou et al, 2007), perlecan (Bix;Iozzo, 2005;Whitelock et al, 2008) and glypican-1 (Aikawa et al, 2008). For example, perlecan modulates VEGF -VEGFR2 signalling events during developmental angiogenesis ; syndecans are necessary for FGFR tyrosine kinase receptor function -syndecans that bind both bFGF and FGFRs may act as stimulators of FGF signalling, whereas syndecans that only bind bFGF may act as inhibitors ). Thus, the fine structure of syndecans (particularly their HS chains) may provide the microenvironmental 'context' that determines the pro-oncogenic or anti-oncogenic function of FGFRs.
Several other studies show significant direct effects of HSPGs on gene expression. For example, over-expression of syndecan-1 influences the expression profiles of other syndecans (Zong et al, 2010) and results in increased nuclear accumulation of FGF-2 (Zong et al, 2009). This suggests the existence of a general mechanism for the regulation of gene expression by HSPGs.
Downregulation of GLCE expression/function in cancer cells may affect the structure of all the HSs and alter the cell (C) Intensity of the amplified epimerase DNA fragments normalised to that of GAPDH. Bars represent the mean ± s.d. from triplicate experiments (OriginPro 8.1). The lane order on the gel corresponds to the bars on the histogram. Cells ¼ epi-U2020 or pETE-U2020 cells; T ¼ epi-U2020 or pETE-U2020 tumours; TB ¼ slow-growing xenografts.
microenvironment, such that 'normal' angiogenesis switches to a malignant process. The most significant changes to the pathways involved in invasion and metastasis were related to the downregulation of MMP2, uPA (PLAU) and the metastasis-associated genes, MTA1 and S1004A. All are associated with a highly metastatic cell phenotype. Matrix metalloproteinases are required for peritumour tissue degradation and metastasis (Overall and López-Otín, 2002), and their expression is generally restricted to aggressive lungmetastatic populations of cancer cells (Minn et al, 2005). uPA and its inhibitor, PAI-I, have a key role in tumour invasion and metastasis (Harbeck et al, 2004), and their expression levels are increased in angiogenic non-small-cell lung tumours (Offersen et al, 2007). MTA1 is a member of a newly discovered family of cancer progression-related genes that are over-expressed in a wide range of human cancers (Toh and Nicolson, 2009), and expression of the metastasis-associated gene, S100A4, is strongly correlated with an aggressive metastatic phenotype (Helfman et al, 2005). Ectopic expression of GLCE in U2020 cells decreased the expression of MMP2, uPA and the metastasis-associated genes, MTA1 and S1004A. This suggests that GLCE may also have potential anti-metastatic effects in vivo. Overall, the results of the present study are consistent with those of previous work investigating the anti-proliferative effects of GLCE over-expression in breast cancer cells in vitro . In both cases, angiogenesis and invasion are thought to be the molecular mechanisms affected by GLCE.
These in vitro results are supported by those from the in vivo experiments comparing the relative expression levels of the same genes in slow-growing xenografts (in which epimerase was expressed) and grown xenografts (epimerase inactivated) . Upregulation of IGF1, HTATIP2, BCL2, TNF, RB1,  TNFRSF6, IFNA1, IFNB1, ITGA1, ITGA3, SNCG, Figure 5 Cancer PathFinder RT2 Profiler PCR Array analysis of epimerase-expressing U2020 cells. The relative expression levels for each gene in epimerase-expressing U2020 cells (Group 1) are plotted against the same gene from the control pETE-U2020 cells (Control Group). The middle line shows the similar expression in both groups with two-fold change boundaries. Genes upregulated greater than two-fold in epi-U2020 cells lie above the middle line and the downregulated genes lie below the line.  Figure 6 The relative expression of growth factors and growth factor receptors in epimerase-expressing U2020 cells versus control pETE-U2020 cells. 1 ¼ Equal expression levels in epimerase-expressing and control cells; 0.50 ¼ two-fold decrease in expression.
ANGPT1, SERPINE1, THBS1, ITGB3, p21, MET and ETS supports the hypothesis that angiogenesis-and invasion-related genes may be the downstream targets of epimerase in U2020 cells. The fact that the expression of other molecules (for e.g., pro-apoptotic or cell cycleregulating genes) was also affected in the in vivo experiments may reflect the complex nature of tumour-host interactions during tumour development, where the surrounding cells and ECM contribute to the overall expression profile. Taken together, the results of the present study strongly suggest that GLCE is a novel regulator of cancer cell proliferation and tumour growth, and may be a promising target for lung cancer diagnosis and treatment.