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An Integrated Web-based System for MEDLINE Analysis: A Case Study of Chronic Kidney Disease

In the era of big data, medical researchers attempt to utilize some analysis techniques like machine learning and text mining on their large-scale corpora to save valuable labor work and time. Consequently, many data analysis platforms are built to support medical professionals such as Pubtator, GeneWays, BioContext, etc. These platforms are helpful to medical entities recognition and relation extraction, but there is not an integrated platform to support researchers’ various needs, and medical projects are isolated from each other, which is hard to be shared and reused. As a result, we present an integrated system containing ‘name entity recognition’, ‘document categorization’ and ‘association extraction’. Besides, we add the concept of ‘socialization’ making projects reusable for further analyses. A case study of chronic kidney disease was adopted to indicate the effectiveness of the proposed system.