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Immunotherapies and Vaccines

Human Immunodeficiency Virus (HIV) was first isolated in 1983 by Barre-Sinoussi and Gallo in parallel at two independent institutions (Barre-Sinoussi, Chermann et al. 1983; Gallo, Sarin et al. 1983). The following year, HIV was established as the causative agent of Acquired Immunodeficiency Syndrome (AIDS). Given such a monumental discovery, there were expectations that an effective vaccine or treatment was not far from being marketed. Unfortunately these expectations have yet to become reality and HIV has become a global epidemic. In 2010, the World Health Organization (WHO) reported that 33.3 million individuals worldwide were living with HIV/AIDS (World Health Organization 2009). The discovery of HIV as the causative agent of AIDS stimulated many areas of basic virological and immunological research. Researchers continue to stress the need for more integrated approaches for development of HIV antiviral treatments and vaccines. In this chapter, the viral and immune challenges, criteria for evaluating clinical studies, candidate therapies and vaccines will be reviewed.


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The other major viral property that works against effective of therapy and viral clearance is viral integration. HIV contains a viral integrase responsible for integration of the HIV provirus into the DNA of an infected cell (Delelis, Carayon et al. 2008). Provirus integration is an essential part of replication (Engelman, Englund et al. 1995). This integrated viral DNA results in both establishment of viral reservoirs in the host and disruption of the immune responses against the infecting virus (Finzi, Blankson et al. 1999;Miedema 2008;Carter, Onafuwa-Nuga et al. 2010;Virgin and Walker 2010). These viral reservoirs are a source of actively replicating viruses in individuals who have controlled infection and have undetectable levels of virus (Wong, Hezareh et al. 1997;Chun, Nickle et al. 2008;Lerner, Guadalupe et al. 2011). Authors Siliciano J.D and Siliciano,R F discuss HIV reservoirs and how they contribute to the lack of virus eradication and the need for continuous HAART therapy by HIV infected individuals to prevent virus rebound (Siliciano and Siliciano 2004). The lack of a defined correlate(s) of protection for HIV is a major obstacle in vaccine and therapeutic development. Humoral immune responses were initially proposed as a correlate of protection. Studies in experimental animals have shown that passively administering anti-HIV antibodies results in protection from infection (Prince, Reesink et al. 1991;Putkonen, Thorstensson et al. 1991;Emini, Schleif et al. 1992). The first prophylaxis vaccine to enter phase III trials, AIDSVAX by VaxGen, induced antibodies to HIV vaccine components but vaccine was not efficacious (Ltd. 2003). The failure of the initial studies has not changed the viewpoint of everyone on the role of humoral responses as the correlate of protection. The antigens used in these studies, monomeric gp120 and monomeric gp160, are not the functional unit of the HIV envelope. The HIV envelope is trimeric on the surface of the virus particle. Studies using trimeric envelope immunogens have been used to improve the humoral responses (Nkolola, Peng et al. 2010;Sundling, Forsell et al. 2010;Sundling, O'Dell et al. 2010). Also, the recent vaccine trial in Thailand, has provided some data to support the possibility that humoral responses may be the HIV correlate of protection (Rerks-Ngarm, Pitisuttithum et al. 2009). Many investigators are designing preventative vaccines for HIV that induces cellular response (Nanjundappa, Wang et al. 2011;Ranasinghe, Eyers et al. 2011;Sistigu, Bracci et al. 2011). Data from preclinical studies, as well as infected individuals, showed that an effective cellular response was able to control viral replication and resulted in reduce progression to diseases (Wilson, Keele et al. 2009;Streeck and Nixon 2010). Coming off the heels of failed humorally-driven trials, the certainty of developing a preventative vaccine is questioned and some in the field believed that preventing progression to disease to be a viable alternate focus. Vaccines aimed at eliciting cellular responses for preventing infection or disease progression have also not been successful. In 2007, the Merck HIV vaccine trial used adenovirus to deliver HIV genes gag, pol and nef .The trial was stopped after intermediate data analysis showed no supportive evidence to continue (Sekaly 2008). It appears that preexisting immune responses to the adenovirus may have increased susceptibility to infection. Other alternative theories of the immune correlates of HIV/AIDS protection need to be considered. The immune correlate(s) for preventing infection and prevention of disease symptoms (i.e. control of infection) may be different (Jose Esparza 1996). In the case of preventative vaccines, an effective initial response to the virus is needed. At the time of the initial assault, the immune system is not dysfunctional. In contrast, during HIV therapy the immune system is in a state of dysregulation due to the constant tug of war with the virus infection. HIV infection causes a dysregulation of the immune response (Kuhrt, Faith et al. www.intechopen.com Immunotherapies and Vaccines 231 2010; Sabado, O'Brien et al. 2010;Kolte, Gaardbo et al. 2011). Therefore, the HIV immunotherapeutic field does not only have to establish the correlate for preventing disease progression but has to overcome the immune dysfunction caused by the viral infection. The moderate success of the Thailand study and the failure of the STEP trial have brought into question both humoral and cellular immunity as the correlates of protection. New vaccine designs are now aimed at inducing both of humoral and cellular responses. The key to overcoming these obstacles faced by drug and vaccine development is continued research not only in terms of treatment, but also basic research of HIV and human immunology.

Evaluation of immunotherapies and vaccines in human trials
Since there is a lack of protective correlate(s), standardized evaluation of clinical responses is needed to develop preventative AIDS vaccines and improved immunotherapies (Pantaleo and Koup 2004). Usually, when a correlate of protection is lacking, a vaccine's ability to provide clinical benefit by reducing mortality and morbidity gives precedent for licensing. Due to the availability of an FDA approved therapy, HAART, any therapy that will be approved is compared to benefits given by HAART. HAART reduces viral loads and restores some level of CD4+T cells in individuals that benefit from therapy. In a clinical setting, the hallmarks or surrogate markers of efficacy are reduction in viral loads and increase in the number of CD4+ T cells (Peto 1996;Peters 2000). While CD4 +T cells increase during HAART therapy leads to better prognosis of disease. Recent Proleukin (rIL-2) clinical trials, SILCAAT and ESPRIT volunteers showed increase in CD4 +T cells but the time to disease progression was not increased. These results have brought into question the validity of increase CD4+T cells as a readout for better disease outcome (Peters and Samuel 2010). The composition of the CD4+ T cell population recovered after therapy was evaluated at the end of the study to determine if the increase CD4+ T cells population was any different from populations seen after HAART therapy. Other T cells have also come into light in the last few years, Th17 cells and cells that secret IL-21 may play a role in the non-disease progression seen in African green monkeys and Sooty Mangabeys (Ciccone, Greenwald et al. 2011;Hartigan-O'Connor, Hirao et al. 2011;Milush, Mir et al. 2011). These trends are also being reported in long-term non-progressors and elite controllers (Hartigan-O'Connor, Hirao et al. 2011;Salgado, Rallun et al. 2011;Salgado, RallÛn et al. 2011). Results in animal studies have shown the possible role of Th17 cells in the gut mucosa in reduced bacterial translocation and slower disease progression (Cecchinato, Trindade et al. 2008;Maloy and Kullberg 2008;Hofer and Speck 2009). There is a lack of consensus on the hallmarks or surrogate markers for preventative vaccine trials. The ideal standard for a preventative HIV vaccine would be sterilizing protection. Sterilizing protection is complete protection from HIV infection, no detectable HIV at any time and no transmission of HIV. In 2007 an NIH workshop on vaccine efficacy resulted in a reported by Follman et al. which stated three parameters for evaluating HIV vaccine efficacy (Follmann, Duerr et al. 2007). The three parameters for evaluating vaccine efficacy are 1) reduction in risk of acquiring HIV 2) the reduction in cumulative risk of progressing to AIDS from the time of infection to diagnosis and 3) reduction in the risk of transmission of HIV to others. Vaccine endpoints are based on years of clinical studies (Peto 1996;Follmann, Duerr et al. 2007;MacLachlan, Mayer et al. 2009). Preclinical (usually NHP) studies have established surrogate markers for vaccine efficacy. Thus far, the most relevant marker identified as a determinant of disease outcome is the reduction of plasma HIV genome RNA levels following infection (Lavreys, Baeten et al. 2006). The viral set point is a consistent marker for determining disease progression; i.e. the higher the viral set point, the more likely a patient will progress to AIDS (Lavreys, Baeten et al. 2006;Kelley, Barbour et al. 2007) The levels of CD4+T cells in the blood of infected individuals can also act as a surrogate of disease progression (Chouquet, Autran et al. 2002). However, the correlation between CD4+ T cell levels in the blood and disease progression becomes more significant closer to the onset of AIDS. Modeling studies have concluded that a reduction in blood viral titers of 1-1.5 log 10 compared to peak infection leads to a significantly positive impact on progression to disease (Davenport, Ribeiro et al. 2004). The other aspect to a preventative vaccine is reduction of viral load leading to reduce transmission. A vaccine that results in a reduction in the rate or probability of transmission would have a positive impact on the HIV global epidemic. In the absence of a sterilizing vaccine, to have a vaccine, that not only lowers viral set point, but also reduces transmission rate would be beneficial (Gurunathan, Habib et al. 2009).

Highly Active Antiviral Therapy (HAART)
Two years after the discovery of the causative agent of AIDS, the first sign of possible treatment was reported in 1985 with the development of the first antiretroviral compound (Mitsuya, Weinhold et al. 1985). This compound was called Retrovir (zidovudine, AZT) and became the first drug in the family of nucleoside reverse transcriptase inhibitors (NRTI). AZT targets the reverse transcription process of HIV's replication cycle. Since AZT, several NRTI and other families of drugs targeting the replication cycle of HIV have been discovered. As of 2010, the FDA has licensed twenty-five antiretroviral drugs. These drugs can be grouped based on the mode of action and are placed into one of the following groups: nucleoside reverse transcriptase inhibitors (NRTI), nucleotide reverse transcriptase inhibitor (NtRTI), non-nucleoside reverse transcriptase inhibitor (NNRTI), protease inhibitor (PI), co-receptor inhibitor (CRI), integrase inhibitor (INI), and fusion inhibitor (FI) (De Clercq 2010). Figure 1 highlights licensed drugs and the mode of action of each group of drugs. In 1996, the first use of combination drug therapy was attempted using a protease inhibitor that was combined with an NRTI (Gulick, Mellors et al. 1997). Combinational therapy confirmed that there was a longer period of undetectable or reduced viral loads as well as recovery of CD4+T cells in the blood. Combination therapy or HAART is now the treatment of choice for HIV infected individuals and results in various clinical outcomes (Greenbaum, Wilson et al. 2008;Crabtree-Ramirez, Villasis-Keever et al. 2010). Individuals on HAART need to be monitored at all times to ensure the combinational therapy is effective and does not result in viral mutants. Individuals on HAART will need their treatment regimen adjusted upon development of viral resistance (Paci, Martini et al. 2011;Von Kleist, Menz et al. 2011). In addition to viral resistance, HAART is highly toxic to patients resulting in reduced patient compliance (John, Moore et al. 2001;Kronenberg, Riehle et al. 2001). Moreover, HAART treatment is expensive and therefore people living in developing countries have less access to drugs even though these are the locations where the epidemic is greatest. Based on surveys and clinical research the WHO has identified factors that need to be considered to determine HAART treatment in an adult 233 (World Health Organization 2006) : 1) suitability of drug combination, 2) licensing of drugs by national regulatory department and recommended dose, 3) toxicity profile of the drug, 4) availability of laboratory monitoring, 5) potential of maintenance and adherence to treatment , 6) prevalence of co-existing infections (e.g. Tuberculosis), 7) child bearing age, 8) availability of local and international manufacturers, and 9) price and effectiveness of drug.
Stages of replication cycle where drugs act: 1) Receptor binding and membrane fusion, 2) RNA genome reverse transcribed into DNA, 3) Provirus integration, 4) Virion egress and maturation. One of the complications that an individual can experience on HAART is immune reconstitution inflammatory syndrome (IRIS) (Letang, Miro et al. 2011). IRIS is seen in individuals recovering from immunodeficiency. Criteria for IRIS 1) Response to antiviral therapy by: viral loads >1 log10/ml decrease in RNA level 2) clinical deterioration of inflammatory of infectious condition upon antiviral treatment and 3) symptoms cannot be alleviated by: clinical course of treatment, medication side effects or toxicity, treatment failure or complete non adherence (Tappuni 2011). IRIS is also recorded in individuals with HIV co-infections such as tuberculosis (Lin, Lai et al. 2010). Additionally, individuals on HAART develop other diseases such as cardiac and metabolic complications that are affiliated with aging (Broder 2010). The side effects of HAART treatment and limited availability in HIV endemic areas are the drive for development of new immunotherapies for HIV.

Expanding HIV therapy from HAART
During HIV infection, the immune system does provide a defense aimed at eradicating the infection. This mounted immune response is insufficient and allows the viral infection to impair the immune system and persist. The use of therapeutics in infected individuals is aimed at overcoming the immune systems impairment to allow for viral control leading to decrease progression to AIDS. Human studies of long term non-progressor and elite progressors have observed a slower progression to disease in these individuals (Rodes, Toro et al. 2004;Okulicz and Lambotte 2011). Long term non-progressors are characterized based on absence of disease, low viral loads, and stable or increasing CD4 T cells. (Paroli, Propato et al. 2001). There is great need for drugs and vaccine strategies that reduce viral loads in infected individuals. Development of an effective HIV therapy needs to incorporate the knowledge that the immune system of an infected individual is dysfunctional. Figure 2 below simplifies the current knowledge of immune dysfunction and pathogenesis of HIV infection and table1 (Fernandez, Lim et al. 2009). Immune dysfunction has been identified in Lymphocytes (T and B cells), NK cells, macrophages and even cytokine secretion.

Dysfunction
References The frequency of CD+ T cells infected by HIV in vivo is too low to account for the CD4 T cell loss (Chun, Carruth et al. 1997), (Douek, Brenchley et al. 2002) Most apoptotic CD4+T cells in peripheral blood and lymph nodes of patients with chronic HIV infection are infected HIV (Finkel, Tudor-Williams et al. 1995) Naïve CD8+T cells, memory B and NK cells as well as CD4+T cells decline in HIV infection (D'Orsogna, Krueger et al. 2007), (Fauci, Mavilio et al. 2005), SIV-infected macaques exhibit a persistently activated immune system and rapidly progress to AIDS, while SIV-infected sooty mangabeys show normal T cell division rates and do not progress to AIDS.
( M Roederer 1995) HIV-2 infection is associated with lower levels of immune activation, which may explain the slower decline of CD4+Tcells compared with HIV-1 infection (Michel, Balde et al. 2000) In mice, TLR7 stimulation unrelated to a virus infection induces immune activation and immunopathology similar to that in HIV infection (Baenziger, Heikenwalder et al. 2009) Table 1. Evidence of dysfunction of the immune system of HIV infected individuals (Fernandez, Lim et al. 2009) Current experimental therapies are grouped based on components and or modes of action, such as the HIV viral proteins targeted, the components of the immune system effected, fusion inhibitors, viral inhibitors, and HIV regulatory protein inhibitors, (Kilby 1999;Peters 2000;Pett 2009). Examples of these can be seen in Table 2.

Remune
Remune, is a whole killed virus with a clade A envelope and a clade G gag depleted of gp120 administered in conjunction with incomplete Freund's adjuvant. This vaccine was shown to be safe and resulted in a maintenance of CD4+T cells in volunteers in a two year follow up study (Sukeepaisarncharoen, Churdboonchart et al. 2001). Remune clinical trial is covered in detail in the article by Fernandez -Cruz et al . The gp120 component of the virus was removed in an effort to present the more conserved antigens to induce T cell responses. In phase II clinical trials this vaccine was combined with HAART, where Remune was administered intramuscularly every 3 months. Trial participants had a mean CD4+T cell count of 586 cells /mm 3 and a mean viral load of 953 RNA copies /ml. Peripheral blood mononuclear cells (PBMC) were collected from trial participants. Following stimulation with Env gp120 depleted virus or recombinant Gag p24, PBMCs proliferate was observed in vaccine volunteers compared to a negative control group that was vaccinated against Candida. In addition, there was proliferation following HIV-specific antigen proliferation in isolated CD8+T, CD4+T and NK cells. Predominantly, memory CD4+T and CD8+T proliferated to HIV antigen stimulation. Remune / HAART combination therapy entered phase III trials, but it was terminated after an intermediate evaluation of the data showed no significant benefit of Remune to the individuals receiving the therapeutic vaccine (Moss, Wallace et al. 1999). Additional studies using only Remune elicited significant increases in CD4+ T cells and reduced viral loads following vaccination . However, Remune /ALVAC did not elicit significant increases in the cytotoxic T cell activity or enhanced CD4+ T cell compared to ALVAC alone. (Angel, Routy et al. 2011). Remune did not meet criteria for evaluation by the FDA as an Immunotherapy. Although these studies with Remune did not result in licensing, these studies contributed to the knowledge of the field with a better appreciation that increases in specific T cell responses measured by in vitro assays do not always correlate with the efficacy of vaccination. Since increase in CD4+ T cells numbers do not correlate with better prognosis better surrogates or immune markers of vaccine efficacy are needed.

Proleukin (recombinant IL-2/rIL-2)
Another form of immunotherapy being investigated for HIV is the use of components of the immune system, including cytokines, innate cells, or T cells (Pett 2009). Investigation of cytokine levels identified IL-2 to be reduced in HIV infected individuals with greatest reduction seen in individuals who progress to disease. (Lane and Fauci 1985;Kannanganat, Kapogiannis et al. 2007). IL-2 is known to be a T cell derived cytokine needed for stimulation of cell proliferation and enhancement of cytolytic activity (Malek and Castro 2010). In the early 20 th century, recombinant IL-2 (rIL-2) was administered to individuals with high and low CD4+T cell counts and low viral loads either intravenously or subcutaneously. IL-2 administration resulted in an increased numbers of CD4+T cell counts, which may be clinically beneficial especially in late stage disease (Arno, Ruiz et al. 1999;Davey, Chaitt et al. 1999;Levy, Capitant et al. 1999). Two rIL-2 trials called SILCAAT and ESPRIT is covered by the report of Peters B. and Samuel M (Peters and Samuel 2010) . The rIL-2, termed Proleukin, was given subcutaneously in both these studies. The SILCAAT trial was designed for late stage HIV infected volunteers as defined by CD4+T cells between 50 and 299 cells/mm 3 and the ESPRIT trial was designed for early stage infected individuals, defined by CD4+T cells counts above 300 cells /mm 3 (Committee 2009). The endpoints for both trials were effect of treatment on disease progression and death. HAART was administered alone or in combination with Proleukin. There was a significant increase in CD4+T cell numbers in patients treated with the combination of HAART/Proleukin compared to HAART alone. Over a period of 7-8 years, there was an increase in cell numbers. Even though the Proleukin treatment increased CD4+T cell numbers, a surrogate maker for vaccine efficacy, the level of toxicity of this drug does not justify its use (Peters and Samuel 2010). Similar to the Remune trials, the use of Proleukin increased CD4+T cells a surrogate marker for vaccine efficacy. The discovery of cytokines linked to HIV immune dysfunction continue. Therefore, the use of interleukins as therapies both directly and as adjuvants need to be carefully considered (Clerici 2010).
In addition to cytokines, other immune system components were investigated as immunotherapies. One such immune component is serum Gc factor the precursor for macrophage activating factor (MAF) (Mosser 2003). During HIV infection, gp120 prevents deglycosylation of Gc factor affecting production of MAF and results in lack of macrophage activation (Nobuto Yamamoto 2009). The use of serum Gc factor as a therapy is a potent macrophage activator and has no side effects in humans (Mosser 2003;Yamamoto, Ushijima et al. 2009

Enfurvirtide (T20)
One of the initial fusion proteins to enter clinical trials was called T20 (Kilby 1999). Following receptor/co-receptor binding, the viral envelope mediates fusion of the cell and viral membrane via the gp41 domain of the HIV envelope. The gp41 heptad repeat sequence is responsible for membrane fusion and is highly conserved between viruses of all clades. A therapy targeted at the fusion domain should overcome the challenge of virus diversity. Initial peptides DP107 and DP178 corresponding to the heptad repeat sequences were found to inhibit viral infectivity in cell culture (Wild, Oas et al. 1992;Wild, Shugars et al. 1994). To further support the theory that disruption of the fusion domain leads to lack of virus infectivity, mutations in the supercoil/heptad repeat region was performed. These mutant viruses could not infect permissive cells. The next step in development of this drug was determining the concentration needed in vivo to inhibit membrane fusion. Based on the DP178 peptide a 36 amino acid peptide was formulated and called T20. This peptide was confirmed to have inhibitory activity in vitro. After in vitro studies, dosing and safety studies were performed using T20 followed by clinical trials using this fusion inhibitor (Wild, Greenwell et al. 1993).
Sixteen HIV-infected adult volunteers were given T20 intravenously for 14 days (Kilby, Hopkins et al. 1998). Subjects were chosen based upon CD4+ T cell counts greater or equal to 100 cells/mm 3 and viral loads of 10,000 or more copies of RNA/ml of plasma. All participants were newly infected and not on therapy or were using antiretroviral therapy but ceased treatment for the trial. People were given 3mg to 100mg intravenous doses. No participants reported any adverse effects or toxicity. A few individuals had elevated temperatures and mild headaches. The drug had a half-life of 1.83 hours. Overall, there was a significant decrease in RNA plasma levels, with the fusion peptide can decrease viral infectivity and indirectly reduce viral load. In a follow up study, increasing doses of T20 over time were used (Kilby, Lalezari et al. 2002). Volunteers with viral loads greater than 5000 copies of RNA/ml of plasma were placed on T20 therapy. Volunteers received either intermittent injection or were fitted with a device to allow for continuous drug infusion instead of intravenous dosing. The trial took place over 28 days of outpatient treatment. Adverse effects were seen in some individuals fitted with the infusion device. The pump used in treatment had frequent alarming caused tender nodules under the skin when infusion took place. Because of this side effect some individuals were taken off the pump and changed to the injection arm of the study. In the case of toxicity one individual withdrew from the study on that basis. Following 28 days of treatment, there was a dose-dependent decline in RNA levels. The best results were seen in individuals receiving intermediate dose of 30mg of T20. Potential T20 resistant-viruses showed the development of multiple point mutations in the present of T20 treatment. Therefore, several conclusion were made: 1) a more user friendly outpatient devise is needed for administering treatment, 2) understanding and characterizing possible resistant virus need to be carefully monitored and 3) correct combination of other antiretroviral therapies and fusion inhibitors need to be considered. T20 was moved to a large phase III clinical trial performed in the United States (TORO1) and Europe/Australia (TORO2) (Joly, Jidar et al. 2010) . TORO1 consisted of 491 individuals who had more than 6 months of therapy including NRTI, NNRTI or protease inhibitors.

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TORO 2 enrolled 504 volunteers with patients having had treatment with one or more of the same groups of antiretroviral (NTRI, NNRTI and PI). Volunteers in both studies had viral loads greater than 5000 copies/ml of plasma. Patients were treated with 90mg of T20 with HAART therapy or therapy alone. After 48 weeks, there was a significant drop in viral loads in the T20 plus antiretroviral therapy versus the antiretroviral treatment alone. The volunteers in the T20/HAART arm of the study had a 2-fold increase in CD4+ T cells counts from baseline compared to HAART alone that lasted greater than 96 weeks. At that point all individuals in the study were placed on T20/HAART. However the responses of the individuals originally on HAART alone never reached the levels of the individuals who received T20/HAART. This outcome indicated that T20 should be given early in treatment. T20 is now called Enfuvirtide and has been licensed by the FDA as the first fusion inhibitor to be used for HIV therapy. This positive step forward in the immunotherapy field fuels the continuous research to find better and safer HIV immunotherapies. Other therapies being investigated include HIV frameshift efficiency modulators, DNAzymes and the theory of alloimmunity. The first two therapies are still early in development. Alloimmunity was observed in a NHP study where animals were protected from virus challenge. After investigation it was concluded that the protection observed because the virus was grown in human PBMCs (Langlois, Weinhold et al. 1992). The use of alloimmunity in the field of HIV vaccines has expanded since the initial finding. Thomas Lehner et al published a report covering discussions during a NIH workshop on the use of alloimmunity as a strategy for HIV vaccines (Lehner, Shearer et al. 2000)

Prophylaxis
Some of the earliest HIV/AIDS vaccines were based upon the envelope protein of the virus (Lasky, Groopman et al. 1986;Arthur, Pyle et al. 1987;Redfield, Birx et al. 1991). Soluble portion of envelope (gp120) or the entire gp160 envelope protein was used as recombinant proteins to vaccinate humans and induce a humoral response (Wintsch, Chaignat et al. 1991;Pincus, Messer et al. 1993). HIV envelope subunit vaccines elicited neutralizing antibody responses following vaccination without toxic side effect in human volunteers. The first phase III clinical trial in pursuit of an effective HIV vaccine was done by VaxGen using their vaccine called AIDSVAX and consisted of a bivalent subunit recombinant gp120 envelope proteins (Francis DP 1998).

Vaxgen (AIDSVAX B/B and B/E) vaccine clinical trial
After showing protection in chimpanzee after homologous and heterologous challenges, the Vaxgen vaccine moved into clinical trials. The primate study was not very well powered and complete protection was not achieved in a suboptimal HIV animal model (Berman, Gregory et al. 1990). The initial VaxGen studies were done with a monovalent vaccine either from the HIV strain MN or IIIB (Migasena, Suntharasamai et al. 2000). Both these envelopes were from lab adapted virus strains. The recombinant proteins envelope MN and IIIB gp120s were produced in engineered bacteria. The phase I and II clinical trials showed that AIDSVAX was well tolerated with irritation just at site of injection. Six individuals acquired HIV during the trial. The vaccine that was sent into phase III clinical trial was bivalent with both clade B envelopes MN and IIIB in an effort to deal with virus diversity. The vaccine trials took place in the US with a total of 5000 at-risk women and homosexual men and parallel studies were conducted in Thailand with intravenous drug users (Francis DP 1998). The vaccines were tailored to the trial sites. In the US, the vaccine consisted of envelopes from clade B. The Thailand vaccine was made from envelopes from clade B and E. Trials were powered to determine efficacy and were scheduled for three years allowing for longterm follow up. The endpoints designated for the trials were infection as measured by seroconversion and viral load as measured by polymerase chain reaction. In 2003, VaxGen reported the failure of its vaccine trial (Profile 2003). There was no significant decrease in infection in individuals who received the vaccine when all individuals were considered. However, the company reported that the vaccine was more immunogenic and produced higher levels of antibody responses in Black and Asian volunteers. Because of this finding, the AIDSVAX was included in a future study in combination with ALVAC-HIV-vCP1521 in Thailand.
Since the beginning of the VaxGen trials, HIV prophylaxis vaccines designed to elicit humoral response have increased in sophistication. Vaccine designs used to induce effective neutralizing antibodies is covered in a review by Vaine et al. (Vaine, Lu et al. 2009). Vaccine designs include use of envelopes with variable loops deleted, glycosylation mutated, eptitope grafting, envelope trimers and centralized sequences. Our lab has been involved in studies to increase antibody response to envelope. The initial studies performed used the molecular adjuvant in combination with sgp120 to increase antibody titers (Green, Montefiori et al. 2003). Results from that study showed that DNA vaccination with sgp120 linked to three copies of C3d efficiently increase antibody tiers in rabbits compared to non-C3d constructs. This work was expanded to link C3d3 to a more native envelope structure. Trimerize envelopes stabilized by the bacteriophage fibritin and linked to C3d showed better cross neutralizing titers to primary isolates compared to trimers without C3d. Both groups of mice vaccinated with envelope trimers with and without C3d induced high antienvelope responses (Bower, Yang et al. 2004). Our lab has also used virus-like particles (VLP) in an effort to present envelope in its native form (Young, Smith et al. 2004). Responses of mice vaccinated with the HIV VLP when compared to soluble gp120 or trimers had higher envelope titers and broader immune responses (McBurney, Young et al. 2007). The VLP induced both mucosal and systemic responses.
In parallel with developing vaccines to eliciting antibody responses vaccines aimed at eliciting T cell responses were being developed (Egan, Pavlat et al. 1995). Both animal and human studies have indicated that CD8+T cells were linked to reduce viral load and led to development of vaccines aimed at producing the ideal cellular responses (Asquith and McLean 2007). Several viral vectors have been used to elicit cellular responses to HIV proteins including poxvirus vectors, vaccinia virus vectors, adenovirus vectors, alphaviruses vectors, avipoxvirus vectors, poliovirus vectors and rhabdovirus vectors (Polo and Dubensky 2002). Viral vectors allow for 1) high production levels of antigens directly into cells, 2) potential adjuvant effect on the immune response given the viral nature of the system and 3) the particular characteristic allows for efficient uptake of vaccine by professional antigen presenting cells to stimulate the immune response. Viral vectors can be mucosal adjuvants. Mucosal stimulation is an asset in HIV vaccine development as most infection takes place via the mucosa (Chenine, Siddappa et al. 2010). There is a major disadvantage to viral vectors, the possibility of pre-existing immunity may lead to adverse effects and reduced immune response directed at the vaccine antigens (Gudmundsdotter, Nilsson et al. 2009;Pine, Kublin et al. 2011). Other strategies that have been investigated for inducing a cellular response include using various vaccine regimens. One of the vaccine regimens that had proved successful in primates to stimulate a cellular response is a DNA prime followed by protein or viral vector boost (Barnett, Burke et al. 2010;Jaoko, Karita et al. 2010;Keefer, Frey et al. 2011).

Merck clinical trial
The Merck vaccine consisted of three recombinant adenoviral vectors of different serotype expressing the genes gag, pol and nef (Shiver, Fu et al. 2002). Preclinical trials in macaques vaccinated with the modified Ad5 expressing gag, pol and nef showed immunogenicity. When monkeys were challenge with SHIV and SIVmac239, animals had reduced viral loads. Further analysis identified the animal's HLA type as a major factor in the outcome of vaccination and efficacy seen. With reduced viral loads in the primate model after challenge the vaccine was moved into clinical trials. During clinical trials phase I and II the vaccine was safe and induce cellular immune responses measured by interferon gamma enzymelinked assay. Interferon gamma enzyme-linked assay (INF gamma ELISPOT) used is the standardize assay for cellular responses in a vaccine setting. STEP phase III trial enrolled a total of 3,000 healthy individuals. The endpoints for the STEP trial as with the VaxGen study were infection and viral load. Each volunteer received three injections of the three genes and received vaccinations two and three 6 months apart from each other. The STEP trial was stop after analysis of data collected from the ongoing study. The study was stopped due to the results pointing to increase rate of infectivity in vaccine groups. This outcome was unexpected as the volunteers in the vaccine arm of the study had quality cellular responses. Quality cellular responses were defined by moderate to high total INF gamma producing cells ELISPOT and the CD8+T cells generated were polyfunctional by ICS staining after stimulation with HIV antigens. The polyfunctional nature of the CD8+T cells was thought to be needed for the ideal response to viral load (Betts and Harari 2008;Hanke 2008). However, the STEP results had an additional element that complicated the outcome. Volunteers who had pre-existing immunity to Ad5 had a trend for higher rates of infectivity (Sekaly 2008).The failure of the STEP trial brought into scrutiny both the use of viral vectors and cellular responses as a correlate of protection. To overcome the hurdle of pre-existing immunity ways to modifying vector delivery and engineering vectors has been under investigation.
After the failure of the STEP vaccine trial, the results of the next phase III vaccine trial was of great interest. The vaccine components had a potential for inducing both cellular and humoral responses. Inducing both humoral and cellular responses to HIV antigens had been investigated as early as 1986 when recombinant vaccinia virus was used to delivery envelope gp41 and gpIIO induced both humoural and cellular responses in macaques (Zarling, Morton et al. 1986).

ALVAC and AIDSVAX clinical trial
The ALVAC and AIDSVAX clinical trial in Thailand enrolled 16402 healthy men and women between the ages of 18-30 years into the study (Rerks-Ngarm, Pitisuttithum et al. 2009). The ALVAC vaccine contains a clade E envelope and a gag/pol from clade B. The AIDSVAX vaccine is the B/E vaccine covered in the previous section. The vaccine trial covered multiple centers and the individuals were randomized into placebo or vaccine groups. Vaccine groups received four injection of the canarypox virus vector vaccine ALVAC, followed by two boost injections with the AIDSVAX B/E recombinant gp120. The endpoints for the trials were HIV infection and early viral loads after the first 6 months and www.intechopen.com every 6 months thereafter for 3 years. Measurement of cellular immunogenicity was done by interferon gamma ELISPOT and intracellular cytokine staining (ICS) for antigens gag and envelope. Humoral responses were measured for binding antibodies to various gp120 envelopes and p24 (gag core). T cell responses via ELISPOT showed a 19.7 % in vaccinated individuals 6 months after the final vaccination. In addition greater cytokine responses were measured in the CD4+ T cells of vaccinated individuals. Binding antibodies to the envelopes MN and A244 present in the vaccine were similar and had a GMT-1 of 31,207 and 14588 respectively. There were only mild to moderate adverse effects mainly at the site of injection as in preliminary studies. When it came to trial endpoints there was no significant difference in viral loads of individuals who got infected whether or not they got the vaccine. Nonetheless there was a silver lining, the study recorded a 31.3% protection rate using a 95%confidence interval. This outcome resulted in ripples across the world. This was the first time any efficacy was reported in an HIV vaccine trial. However, a study did not result in the elucidation of a correlate of protection for HIV. The only immune parameter measured that should any potential as a correlate of protection was antibody binding to envelopes. This vaccine trial infused a new hope into the HIV vaccine field, showing that protection from infection was possible.
Besides establishing correlates of protection the HIV vaccine field has other hurdles to overcome. These challenges include (Moutsopoulos, Nares et al. 2007)vaccine design to overcoming variability and induce the appropriate immune response at the mucosal surface. The two main strategies being used to overcome virus variability are using centralized sequence usually based on envelopes of one or multiple clades, mosaic antigens and polyvalent vaccines consisting of multiple genes of HIV from one or multiple clades ( (Gao 2007). The use of the centralized immunogens resulted in a superior breadth of cellular and humoral immune response (Kothe, Li et al. 2006;Liao, Sutherland et al. 2006;Kothe, Decker et al. 2007;Santra, Korber et al. 2008). In regard to generating mucosal immunity different vaccine strategies including vaccination at oral or vaginal in primates and use of adjuvants are being investigated to establish protective immune response at the mucosa (Peters, Peng et al. 2003;Duerr 2010;Sui, Zhu et al. 2010 In therapeutic research, studies are expanding to include drugs targeted at eliminating viral reservoirs (Huelsmann, Hofmann et al. 2011;Kovochich, Marsden et al. 2011). Follow up studies of individuals on HAART are being done to evaluating health and treatment efficacy (Mahdavi, Malyuta et al. 2010;Torti, d'Arminio-Monforte et al. 2011). Findings from these evaluations will be use to better treatments and evaluate possible side effects of long term drug use (Boyd and Hill 2010;Kranzer, Lewis et al. 2010;Shapiro, Hughes et al. 2010;Shrestha, Sudenga et al. 2010). Another area of HIV therapy receiving increase attention is the use and effectiveness of HAART in individuals with cancer and bacterial/virus coinfections such as tuberculosis, HPV (Crane, Sirivichayakul et al. 2010;Hermans, Kiragga et al. 2010;Minkoff, Zhong et al. 2010). New strategies or modification of old strategies are being used for vaccine development as more knowledge of the virus and the immune response to the virus continue to be dissected. Table 3 shows vaccine strategies used over the years and their limitations. One example is seen in a paper by Somogyi, E., J. Xu, et al where a VLP is used to present 15 antigens (Somogyi, Xu et al. 2011). While this vaccine is design for therapeutic purposes the platform could be applied to prophylaxis vaccines as well.  Table 3. HIV-1 vaccine design adapted from" Strategies for an HIV vaccine" by Norman L. Letvin (Letvin 2002) www.intechopen.com Besides the strategies seen in the table prophylaxis treatment being investigated are topical microbicides, combination therapy of vaccines and microbicides and the use of antivirals as preventative treatment (PrEP) (Chirenje, Marrazzo et al. 2010;Mayer and Venkatesh 2010;Brinckmann, da Costa et al. 2011;Oh, Price et al. 2011). In areas where women are prohibited from use of condoms the use of effective microbicides would allow these women to protect themselves from infection. In the case of microbicides time of application is an essential part of evaluation. The use of antiviral as post exposure treatment for healthcare workers is also under investigation. PrEP has been expanded to other individuals, including men who have sex with men. A national clinical trial was completed and results of trial were reported this year (2011). The PrEP was safe and resulted in partial efficiency in reducing HIV acquisition (DK Smith 2011). One concern of PrEP is the development of drug resistant viruses due to therapy prior to infection (Abbas, Hood et al. 2011).
The war against HIV continues to be fought with scientific innovation together with continued funding from both government and private agencies. With such continued efforts the road to epidemic control and /eradication may be closer than it was over twenty-five years ago. The continuing AIDS pandemic reminds us that despite the unrelenting quest for knowledge since the early 1980s, we have much to learn about HIV and AIDS. This terrible syndrome represents one of the greatest challenges for science and medicine. The purpose of this book is to aid clinicians, provide a source of inspiration for researchers, and serve as a guide for graduate students in their continued search for a cure of HIV. The first part of this book, â€oeFrom the laboratory to the clinic,â€ and the second part, â€oeFrom the clinic to the patients,â€ represent the unique but intertwined mission of this work: to provide basic and clinical knowledge on HIV/AIDS.