Error models for mode-mismatch in linear optics quantum computing
  One of the most significant challenges facing the development of linear optics quantum computing (LOQC) is mode-mismatch, whereby photon distinguishability is introduced within circuits, undermining quantum interference effects. We examine the effects of mode-mismatch on the parity (or fusion) gate, the fundamental building block in several recent LOQC schemes. We derive simple error models for the effects of mode-mismatch on its operation, and relate these error models to current fault tolerant threshold estimates. 
Peter P. Rohde, Timothy C. Ralph