Non-equilibrium effects on line-of-sight size estimates of QSO   absorption systems
  Estimates of the linear extent of heavy-element absorption systems along the line-of-sight to a QSO often assume that the cloud is photoionized and that the temperature takes the equilibrium value where photo-heating balances line cooling. We show that rather small deviations from this photoionization equilibrium temperature caused by additional heating processes will lead to an overestimate of the neutral hydrogen fraction and thus to an underestimate of the thickness of the absorber by about two orders of magnitude. Such temperature deviations are indicated both by observations and numerical simulations. This interpretation reconciles the discrepancy between the rather small extent of heavy-element-absorption systems parallel to the line-of-sight obtained from a standard photoionization analysis and the much larger transverse sizes estimates inferred from the observation of common absorption in the spectra of close quasar pairs. 
Martin G. Haehnelt (MPA-Garching), Michael Rauch (Caltech) and   Matthias Steinmetz (Berkeley)