Scaling Laws in Spatial Network Formation
  Geometric constraints impact the formation of a broad range of spatial networks, from amino acid chains folding to proteins structures to rearranging particle aggregates. How the network of interactions dynamically self-organizes in such systems is far from fully understood. Here, we analyze a class of spatial network formation processes by introducing a mapping from geometric to graph-theoretic constraints. Combining stochastic and mean field analyses yields an algebraic scaling law for the extent (graph diameter) of the resulting networks with system size, in contrast to logarithmic scaling known for networks without constraints. Intriguingly, the exponent falls between that of self-avoiding random walks and that of space filling arrangements, consistent with experimentally observed scaling (of the spatial radius of gyration) for protein tertiary structures. 
Nora Molkenthin, Marc Timme
q-bio.MN nlin.AO physics.soc-ph