{"action":"created","issue":{"url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/5317","repository_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs","labels_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/5317/labels{/name}","comments_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/5317/comments","events_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/5317/events","html_url":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317","id":272519063,"number":5317,"title":" Software needed for thesis Sander","user":{"login":"tovrstra","id":99431,"avatar_url":"https://avatars3.githubusercontent.com/u/99431?v=4","gravatar_id":"","url":"https://api.github.com/users/tovrstra","html_url":"https://github.com/tovrstra","followers_url":"https://api.github.com/users/tovrstra/followers","following_url":"https://api.github.com/users/tovrstra/following{/other_user}","gists_url":"https://api.github.com/users/tovrstra/gists{/gist_id}","starred_url":"https://api.github.com/users/tovrstra/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tovrstra/subscriptions","organizations_url":"https://api.github.com/users/tovrstra/orgs","repos_url":"https://api.github.com/users/tovrstra/repos","events_url":"https://api.github.com/users/tovrstra/events{/privacy}","received_events_url":"https://api.github.com/users/tovrstra/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2017-11-09T10:48:43Z","updated_at":"2017-11-09T11:22:13Z","closed_at":null,"author_association":"CONTRIBUTOR","pull_request":{"url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/5317","html_url":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317","diff_url":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317.diff","patch_url":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317.patch"},"body":"I have some questions about the NAMD easyconfig:\r\n- The download from the NAMD website (requires login) is a `tar` file and not a `tar.gz` file. Still, the `.gz` extension is present. I've added a comment to reduce the confusion. I hope this is OK.\r\n- Is there a way to change the easyconfig such that it uses `Tcl/8.6.7-GCCcore-6.4.0` instead of `Tcl/8.6.6-intel-2017b`. The former is loaded with Python/3.6.3-intel-2017b and may cause conflicts when loading NAMD afterwards. How should we deal with this?"},"comment":{"url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/comments/343125647","html_url":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317#issuecomment-343125647","issue_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/5317","id":343125647,"user":{"login":"boegel","id":620876,"avatar_url":"https://avatars1.githubusercontent.com/u/620876?v=4","gravatar_id":"","url":"https://api.github.com/users/boegel","html_url":"https://github.com/boegel","followers_url":"https://api.github.com/users/boegel/followers","following_url":"https://api.github.com/users/boegel/following{/other_user}","gists_url":"https://api.github.com/users/boegel/gists{/gist_id}","starred_url":"https://api.github.com/users/boegel/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/boegel/subscriptions","organizations_url":"https://api.github.com/users/boegel/orgs","repos_url":"https://api.github.com/users/boegel/repos","events_url":"https://api.github.com/users/boegel/events{/privacy}","received_events_url":"https://api.github.com/users/boegel/received_events","type":"User","site_admin":false},"created_at":"2017-11-09T11:22:13Z","updated_at":"2017-11-09T11:22:13Z","author_association":"OWNER","body":"@tovrstra Which comment are you referring to for NAMD, I don't see it in the easyconfig file?\r\n\r\nIf the source filename is incorrectly named, you probably need to specify the correct extraction command yourself, since EasyBuild relies on the file extension being correct. See http://easybuild.readthedocs.io/en/latest/Writing_easyconfig_files.html#common-easyconfig-param-sources-alt.\r\n\r\nTo fix the Tcl issue, why not bump the Tcl version for NAMD to 8.6.7? Note that `Tcl-8.6.7-GCCcore-6.4.0.eb` suffices to resolve that dependency; since EasyBuild v3.x, `eb` will also consider subtoolchains if an easyconfig with the 'parent' toolchain (`intel` here) is not found."}}
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