{"action":"created","issue":{"url":"https://api.github.com/repos/brain-life/app-life/issues/2","repository_url":"https://api.github.com/repos/brain-life/app-life","labels_url":"https://api.github.com/repos/brain-life/app-life/issues/2/labels{/name}","comments_url":"https://api.github.com/repos/brain-life/app-life/issues/2/comments","events_url":"https://api.github.com/repos/brain-life/app-life/issues/2/events","html_url":"https://github.com/brain-life/app-life/issues/2","id":249777121,"number":2,"title":"Does LiFE use t1 input?","user":{"login":"soichih","id":923896,"avatar_url":"https://avatars3.githubusercontent.com/u/923896?v=4","gravatar_id":"","url":"https://api.github.com/users/soichih","html_url":"https://github.com/soichih","followers_url":"https://api.github.com/users/soichih/followers","following_url":"https://api.github.com/users/soichih/following{/other_user}","gists_url":"https://api.github.com/users/soichih/gists{/gist_id}","starred_url":"https://api.github.com/users/soichih/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/soichih/subscriptions","organizations_url":"https://api.github.com/users/soichih/orgs","repos_url":"https://api.github.com/users/soichih/repos","events_url":"https://api.github.com/users/soichih/events{/privacy}","received_events_url":"https://api.github.com/users/soichih/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2017-08-12T00:43:27Z","updated_at":"2017-08-17T08:30:44Z","closed_at":null,"body":"app-life currently requires t1 as one of the input file. @kitchell and I believe that it's not used by LiFE, or that it works without it. We ran LiFE with bogus path to t1 and LiFE finished successfully.\r\n\r\n@francopestilli Please let me know if we should get rid of t1 input - this simplifies our workflow and make it easier for user to submit LiFE."},"comment":{"url":"https://api.github.com/repos/brain-life/app-life/issues/comments/323004612","html_url":"https://github.com/brain-life/app-life/issues/2#issuecomment-323004612","issue_url":"https://api.github.com/repos/brain-life/app-life/issues/2","id":323004612,"user":{"login":"francopestilli","id":2119795,"avatar_url":"https://avatars2.githubusercontent.com/u/2119795?v=4","gravatar_id":"","url":"https://api.github.com/users/francopestilli","html_url":"https://github.com/francopestilli","followers_url":"https://api.github.com/users/francopestilli/followers","following_url":"https://api.github.com/users/francopestilli/following{/other_user}","gists_url":"https://api.github.com/users/francopestilli/gists{/gist_id}","starred_url":"https://api.github.com/users/francopestilli/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/francopestilli/subscriptions","organizations_url":"https://api.github.com/users/francopestilli/orgs","repos_url":"https://api.github.com/users/francopestilli/repos","events_url":"https://api.github.com/users/francopestilli/events{/privacy}","received_events_url":"https://api.github.com/users/francopestilli/received_events","type":"User","site_admin":false},"created_at":"2017-08-17T08:30:43Z","updated_at":"2017-08-17T08:30:43Z","body":"Let me check when back.\n\nFranco\n\nsent via phone, pardon brevity and mistakes.\n\nOn Aug 16, 2017 5:55 PM, \"Soichi Hayashi\" <notifications@github.com> wrote:\n\n@francopestilli <https://github.com/francopestilli>\n\nI've looked at the latest encode code, and I couldn't find any code that's\nusing fe.path.anatomy once it's set by feSet - as far as I can tell. There\nmight be some matlab magic happening somewhere, but xform seems to be\nalways set from dwiFile / qto_xyz.\n\nCan you point me to the code where T1 is actually read by encode?\n\n—\nYou are receiving this because you were mentioned.\nReply to this email directly, view it on GitHub\n<https://github.com/brain-life/app-life/issues/2#issuecomment-322817362>,\nor mute the thread\n<https://github.com/notifications/unsubscribe-auth/ACBYc22waJ9QIHxDKulO_ceHO_6LHkI2ks5sYxEGgaJpZM4O1QkU>\n.\n"}}
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