{"action":"created","issue":{"url":"https://api.github.com/repos/alyssafrazee/ballgown/issues/59","repository_url":"https://api.github.com/repos/alyssafrazee/ballgown","labels_url":"https://api.github.com/repos/alyssafrazee/ballgown/issues/59/labels{/name}","comments_url":"https://api.github.com/repos/alyssafrazee/ballgown/issues/59/comments","events_url":"https://api.github.com/repos/alyssafrazee/ballgown/issues/59/events","html_url":"https://github.com/alyssafrazee/ballgown/issues/59","id":68070551,"number":59,"title":"Determine alternative splicing between samples","user":{"login":"PeterVenhuizen","id":11519125,"avatar_url":"https://avatars3.githubusercontent.com/u/11519125?v=3","gravatar_id":"","url":"https://api.github.com/users/PeterVenhuizen","html_url":"https://github.com/PeterVenhuizen","followers_url":"https://api.github.com/users/PeterVenhuizen/followers","following_url":"https://api.github.com/users/PeterVenhuizen/following{/other_user}","gists_url":"https://api.github.com/users/PeterVenhuizen/gists{/gist_id}","starred_url":"https://api.github.com/users/PeterVenhuizen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/PeterVenhuizen/subscriptions","organizations_url":"https://api.github.com/users/PeterVenhuizen/orgs","repos_url":"https://api.github.com/users/PeterVenhuizen/repos","events_url":"https://api.github.com/users/PeterVenhuizen/events{/privacy}","received_events_url":"https://api.github.com/users/PeterVenhuizen/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":4,"created_at":"2015-04-13T11:06:27Z","updated_at":"2017-05-31T14:49:38Z","closed_at":"2015-04-13T15:29:38Z","body":"I was wondering whether it is possible to determine alternative splicing between samples with Ballgown. With cuffdiff there is the splicing.diff output file, but so far I could only find information on transcript differential expression and not something for transcript differential splicing between samples.\n\nThanks in advance!\n"},"comment":{"url":"https://api.github.com/repos/alyssafrazee/ballgown/issues/comments/305210571","html_url":"https://github.com/alyssafrazee/ballgown/issues/59#issuecomment-305210571","issue_url":"https://api.github.com/repos/alyssafrazee/ballgown/issues/59","id":305210571,"user":{"login":"pradeepphule","id":17140112,"avatar_url":"https://avatars0.githubusercontent.com/u/17140112?v=3","gravatar_id":"","url":"https://api.github.com/users/pradeepphule","html_url":"https://github.com/pradeepphule","followers_url":"https://api.github.com/users/pradeepphule/followers","following_url":"https://api.github.com/users/pradeepphule/following{/other_user}","gists_url":"https://api.github.com/users/pradeepphule/gists{/gist_id}","starred_url":"https://api.github.com/users/pradeepphule/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pradeepphule/subscriptions","organizations_url":"https://api.github.com/users/pradeepphule/orgs","repos_url":"https://api.github.com/users/pradeepphule/repos","events_url":"https://api.github.com/users/pradeepphule/events{/privacy}","received_events_url":"https://api.github.com/users/pradeepphule/received_events","type":"User","site_admin":false},"created_at":"2017-05-31T14:49:38Z","updated_at":"2017-05-31T14:49:38Z","body":"how to visualize differeential splicing , i tried using plotsplice() function from limma after executiong above code for my data but it do not show logfc value correctly also start position is missing in the plot."}}
{"actor":{"display_login":"pradeepphule"}}