{"action":"created","issue":{"url":"https://api.github.com/repos/clingen-data-model/clingen-interpretation/issues/179","repository_url":"https://api.github.com/repos/clingen-data-model/clingen-interpretation","labels_url":"https://api.github.com/repos/clingen-data-model/clingen-interpretation/issues/179/labels{/name}","comments_url":"https://api.github.com/repos/clingen-data-model/clingen-interpretation/issues/179/comments","events_url":"https://api.github.com/repos/clingen-data-model/clingen-interpretation/issues/179/events","html_url":"https://github.com/clingen-data-model/clingen-interpretation/issues/179","id":283290302,"number":179,"title":"RegionAllelesOutcome","user":{"login":"cbizon","id":10744350,"avatar_url":"https://avatars2.githubusercontent.com/u/10744350?v=4","gravatar_id":"","url":"https://api.github.com/users/cbizon","html_url":"https://github.com/cbizon","followers_url":"https://api.github.com/users/cbizon/followers","following_url":"https://api.github.com/users/cbizon/following{/other_user}","gists_url":"https://api.github.com/users/cbizon/gists{/gist_id}","starred_url":"https://api.github.com/users/cbizon/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cbizon/subscriptions","organizations_url":"https://api.github.com/users/cbizon/orgs","repos_url":"https://api.github.com/users/cbizon/repos","events_url":"https://api.github.com/users/cbizon/events{/privacy}","received_events_url":"https://api.github.com/users/cbizon/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"larrybabb","id":959003,"avatar_url":"https://avatars1.githubusercontent.com/u/959003?v=4","gravatar_id":"","url":"https://api.github.com/users/larrybabb","html_url":"https://github.com/larrybabb","followers_url":"https://api.github.com/users/larrybabb/followers","following_url":"https://api.github.com/users/larrybabb/following{/other_user}","gists_url":"https://api.github.com/users/larrybabb/gists{/gist_id}","starred_url":"https://api.github.com/users/larrybabb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/larrybabb/subscriptions","organizations_url":"https://api.github.com/users/larrybabb/orgs","repos_url":"https://api.github.com/users/larrybabb/repos","events_url":"https://api.github.com/users/larrybabb/events{/privacy}","received_events_url":"https://api.github.com/users/larrybabb/received_events","type":"User","site_admin":false},"assignees":[{"login":"larrybabb","id":959003,"avatar_url":"https://avatars1.githubusercontent.com/u/959003?v=4","gravatar_id":"","url":"https://api.github.com/users/larrybabb","html_url":"https://github.com/larrybabb","followers_url":"https://api.github.com/users/larrybabb/followers","following_url":"https://api.github.com/users/larrybabb/following{/other_user}","gists_url":"https://api.github.com/users/larrybabb/gists{/gist_id}","starred_url":"https://api.github.com/users/larrybabb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/larrybabb/subscriptions","organizations_url":"https://api.github.com/users/larrybabb/orgs","repos_url":"https://api.github.com/users/larrybabb/repos","events_url":"https://api.github.com/users/larrybabb/events{/privacy}","received_events_url":"https://api.github.com/users/larrybabb/received_events","type":"User","site_admin":false},{"login":"cbizon","id":10744350,"avatar_url":"https://avatars2.githubusercontent.com/u/10744350?v=4","gravatar_id":"","url":"https://api.github.com/users/cbizon","html_url":"https://github.com/cbizon","followers_url":"https://api.github.com/users/cbizon/followers","following_url":"https://api.github.com/users/cbizon/following{/other_user}","gists_url":"https://api.github.com/users/cbizon/gists{/gist_id}","starred_url":"https://api.github.com/users/cbizon/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cbizon/subscriptions","organizations_url":"https://api.github.com/users/cbizon/orgs","repos_url":"https://api.github.com/users/cbizon/repos","events_url":"https://api.github.com/users/cbizon/events{/privacy}","received_events_url":"https://api.github.com/users/cbizon/received_events","type":"User","site_admin":false}],"milestone":{"url":"https://api.github.com/repos/clingen-data-model/clingen-interpretation/milestones/1","html_url":"https://github.com/clingen-data-model/clingen-interpretation/milestone/1","labels_url":"https://api.github.com/repos/clingen-data-model/clingen-interpretation/milestones/1/labels","id":2978043,"number":1,"title":"interp-v1","description":"","creator":{"login":"larrybabb","id":959003,"avatar_url":"https://avatars1.githubusercontent.com/u/959003?v=4","gravatar_id":"","url":"https://api.github.com/users/larrybabb","html_url":"https://github.com/larrybabb","followers_url":"https://api.github.com/users/larrybabb/followers","following_url":"https://api.github.com/users/larrybabb/following{/other_user}","gists_url":"https://api.github.com/users/larrybabb/gists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many of our ValueSets that could have either Yes or No outcomes (like null allele), we only made a value for the Yes version, and used the NOT qualifier to make the No outcome.\r\n\r\nFor RegionAllelesOutcome, however, we have a value set with both the Yes and No terms.\r\n\r\nWas this on purpose, or an oversight?  I think the latter, and I think we should change it to conform.  I'm going to write the documentation as if we are making it only have the Yes outcome, so either we need to change the value set or we need to change the docs."},"comment":{"url":"https://api.github.com/repos/clingen-data-model/clingen-interpretation/issues/comments/352824951","html_url":"https://github.com/clingen-data-model/clingen-interpretation/issues/179#issuecomment-352824951","issue_url":"https://api.github.com/repos/clingen-data-model/clingen-interpretation/issues/179","id":352824951,"user":{"login":"mbrush","id":5184212,"avatar_url":"https://avatars1.githubusercontent.com/u/5184212?v=4","gravatar_id":"","url":"https://api.github.com/users/mbrush","html_url":"https://github.com/mbrush","followers_url":"https://api.github.com/users/mbrush/followers","following_url":"https://api.github.com/users/mbrush/following{/other_user}","gists_url":"https://api.github.com/users/mbrush/gists{/gist_id}","starred_url":"https://api.github.com/users/mbrush/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mbrush/subscriptions","organizations_url":"https://api.github.com/users/mbrush/orgs","repos_url":"https://api.github.com/users/mbrush/repos","events_url":"https://api.github.com/users/mbrush/events{/privacy}","received_events_url":"https://api.github.com/users/mbrush/received_events","type":"User","site_admin":false},"created_at":"2017-12-19T17:12:58Z","updated_at":"2017-12-19T17:12:58Z","author_association":"NONE","body":"Here is a case where ontology terms exist that map to the negated assertion - see row  220-221 of  the spreadsheet.  So it is up to us if we want to use these as values for the affirmative and the negation, or go with a single value in the value set that can be negated with a NOT qualifier.  \r\n\r\nAnother consideration for this value set in particular is that RegionAlleles is an assertion about the positional relationship between an allele and a region. While there are currently only two possible values (bounded or not), there may be more if we want to support additional nuance/precision here.  e.g. see other RO relations related to relative position of sequences. \r\n\r\nGiven this, it would be perfectly fine to me to create a value set here with two values, and possibly more in the future. if we want this structure to be as flexible and accommodating as possible. (This may be something to think about for other booleans we converted to a single-valued value set with possibility for negation).\r\n\r\nLets discuss on next call.\r\n"}}
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