{"action":"created","issue":{"url":"https://api.github.com/repos/zeiss-microscopy/libCZI/issues/4","repository_url":"https://api.github.com/repos/zeiss-microscopy/libCZI","labels_url":"https://api.github.com/repos/zeiss-microscopy/libCZI/issues/4/labels{/name}","comments_url":"https://api.github.com/repos/zeiss-microscopy/libCZI/issues/4/comments","events_url":"https://api.github.com/repos/zeiss-microscopy/libCZI/issues/4/events","html_url":"https://github.com/zeiss-microscopy/libCZI/issues/4","id":266980469,"number":4,"title":"Axio Scan Z1 support","user":{"login":"Jondeen","id":763025,"avatar_url":"https://avatars0.githubusercontent.com/u/763025?v=4","gravatar_id":"","url":"https://api.github.com/users/Jondeen","html_url":"https://github.com/Jondeen","followers_url":"https://api.github.com/users/Jondeen/followers","following_url":"https://api.github.com/users/Jondeen/following{/other_user}","gists_url":"https://api.github.com/users/Jondeen/gists{/gist_id}","starred_url":"https://api.github.com/users/Jondeen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Jondeen/subscriptions","organizations_url":"https://api.github.com/users/Jondeen/orgs","repos_url":"https://api.github.com/users/Jondeen/repos","events_url":"https://api.github.com/users/Jondeen/events{/privacy}","received_events_url":"https://api.github.com/users/Jondeen/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2017-10-19T20:35:51Z","updated_at":"2017-10-25T16:26:59Z","closed_at":null,"author_association":"NONE","body":"Hi,\r\n\r\nDoes this library support the CZI-files produced from the Axio Scan Z1?\r\n\r\nThanks,\r\nJonas Øgaard"},"comment":{"url":"https://api.github.com/repos/zeiss-microscopy/libCZI/issues/comments/339388592","html_url":"https://github.com/zeiss-microscopy/libCZI/issues/4#issuecomment-339388592","issue_url":"https://api.github.com/repos/zeiss-microscopy/libCZI/issues/4","id":339388592,"user":{"login":"Jondeen","id":763025,"avatar_url":"https://avatars0.githubusercontent.com/u/763025?v=4","gravatar_id":"","url":"https://api.github.com/users/Jondeen","html_url":"https://github.com/Jondeen","followers_url":"https://api.github.com/users/Jondeen/followers","following_url":"https://api.github.com/users/Jondeen/following{/other_user}","gists_url":"https://api.github.com/users/Jondeen/gists{/gist_id}","starred_url":"https://api.github.com/users/Jondeen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Jondeen/subscriptions","organizations_url":"https://api.github.com/users/Jondeen/orgs","repos_url":"https://api.github.com/users/Jondeen/repos","events_url":"https://api.github.com/users/Jondeen/events{/privacy}","received_events_url":"https://api.github.com/users/Jondeen/received_events","type":"User","site_admin":false},"created_at":"2017-10-25T16:26:59Z","updated_at":"2017-10-25T16:26:59Z","author_association":"NONE","body":"I had some issues compiling the command line tool, mostly thanks to limitations of earlier versions of the gcc/g++ compilers and the glibc libraries (building on linux). As far as I can tell, minimum g++-version needs to be 5.x [for a C++11 standard library (requires at least v4.7), but which also supports codecvt](https://stackoverflow.com/questions/15615136/is-codecvt-not-a-std-header), and upon running with a glibc version at 2.12, I'm getting errors complaining about undeclared align_alloc, which is seemingly resolved by using [glibc versions at or beyond 2.17](https://github.com/Microsoft/CNTK/issues/729). Just putting this out there if other people are running into similar issues.\r\n\r\nBut more importantly, I can't get the binaries to work even when compiled successfully.\r\nUnder glibc 2.19, g++ 5.4.1, Ubuntu trusty 14.04:\r\n`$./CZIcmd -c ExtractAttachment -s A2.czi -o test`\r\n`FATAL ERROR: std:exception caught`\r\n` -> std::exception`\r\n\r\nUnder glibc 2.23, g++ 5.4.0, Ubuntu xenial 16.04 (under WSL):\r\n`$./CZIcmd -c ExtractAttachment -s A2.czi -o test`\r\n(exits normally with no output, but nothing is written to disk)\r\n\r\nA bit in the dark about what extra information I can supply to ease debugging, but if anyone has had similar things happen to them any insights would be most welcome."}}
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