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Rostrup editors, Proceedings of the 15th\n+# Python in Science Conference, pages 102-109, Austin, TX, 2016. SciPy.\n+#\n+# N. Michaud-Agrawal, E. J. Denning, T. B. Woolf, and O. Beckstein.\n+# MDAnalysis: A Toolkit for the Analysis of Molecular Dynamics Simulations.\n+# J. Comput. Chem. 32 (2011), 2319--2327, doi:10.1002/jcc.21787\n+#\n+\"\"\"\n+TXYZ file format --- :mod:`MDAnalysis.coordinates.TXYZ`\n+=======================================================\n+\n+Coordinate reader for Tinker xyz files .txyz and trajectory .arc files\n+Differences between Tinker format and normal xyz files: \n+ - there is only one header line containing both the number of atoms and a comment\n+ - column 1 contains atom numbers (starting from 1)\n+ - column 6 contains atoms types \n+ - the following columns indicate connectivity (atoms to which that particular atom is bonded, according to numbering in column 1)\n+\n+Tinker format: http://chembytes.wikidot.com/tnk-tut00#toc2","path":"package/MDAnalysis/coordinates/TXYZ.py","position":33,"original_position":33,"commit_id":"a5cc2a513c4fda76335ba0c70bdfcf3a8810c8f9","original_commit_id":"a5cc2a513c4fda76335ba0c70bdfcf3a8810c8f9","user":{"login":"orbeckst","id":237980,"avatar_url":"https://avatars0.githubusercontent.com/u/237980?v=4","gravatar_id":"","url":"https://api.github.com/users/orbeckst","html_url":"https://github.com/orbeckst","followers_url":"https://api.github.com/users/orbeckst/followers","following_url":"https://api.github.com/users/orbeckst/following{/other_user}","gists_url":"https://api.github.com/users/orbeckst/gists{/gist_id}","starred_url":"https://api.github.com/users/orbeckst/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/orbeckst/subscriptions","organizations_url":"https://api.github.com/users/orbeckst/orgs","repos_url":"https://api.github.com/users/orbeckst/repos","events_url":"https://api.github.com/users/orbeckst/events{/privacy}","received_events_url":"https://api.github.com/users/orbeckst/received_events","type":"User","site_admin":false},"body":"Please use reST links (see example for Tinker in other comment). 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