{"action":"opened","issue":{"url":"https://api.github.com/repos/neurodata/checklists/issues/39","repository_url":"https://api.github.com/repos/neurodata/checklists","labels_url":"https://api.github.com/repos/neurodata/checklists/issues/39/labels{/name}","comments_url":"https://api.github.com/repos/neurodata/checklists/issues/39/comments","events_url":"https://api.github.com/repos/neurodata/checklists/issues/39/events","html_url":"https://github.com/neurodata/checklists/issues/39","id":201367459,"number":39,"title":"new algorithms.md feedback","user":{"login":"rmarren1","id":10272301,"avatar_url":"https://avatars.githubusercontent.com/u/10272301?v=3","gravatar_id":"","url":"https://api.github.com/users/rmarren1","html_url":"https://github.com/rmarren1","followers_url":"https://api.github.com/users/rmarren1/followers","following_url":"https://api.github.com/users/rmarren1/following{/other_user}","gists_url":"https://api.github.com/users/rmarren1/gists{/gist_id}","starred_url":"https://api.github.com/users/rmarren1/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rmarren1/subscriptions","organizations_url":"https://api.github.com/users/rmarren1/orgs","repos_url":"https://api.github.com/users/rmarren1/repos","events_url":"https://api.github.com/users/rmarren1/events{/privacy}","received_events_url":"https://api.github.com/users/rmarren1/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2017-01-17T18:26:21Z","updated_at":"2017-01-17T18:26:21Z","closed_at":null,"body":"The only part I disliked was repeating the data simulation generation and plotting 10 times in steps 10 and 11 in the Simulation Analysis. The simulation data is often high dimensional and multiple plots are needed to show correctness, which results in the need for (in my case) 40+ high dimensional plots which take up a lot of space on Github (30+ megabytes), eat up a lot of RAM making the notebooks difficult to work in, and force people to scroll a lot in the notebook. I think that plotting a histogram of the 'metric' defined in Simulation Analysis step 7, and verbally reporting whether the qualitative plots on repeat trials appeared similar to the original could achieve the same goal.\r\n\r\nOverall I think the blocked structure is better than the linear structure in the previous algorithms.md. The only deviation I found myself making was creating a new preceding section where I described at a high level the assumptions, guarantees, and basic theoretical properties of the algorithm which helped collect thoughts about what distributions should work well and which would fail. I don't know how others would feel about adding work, but I found that this step saved me time because I was more confident in my choices in distributions and didn't have to backtrack and change them."}}
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