{"action":"created","issue":{"url":"https://api.github.com/repos/choderalab/yank/issues/863","repository_url":"https://api.github.com/repos/choderalab/yank","labels_url":"https://api.github.com/repos/choderalab/yank/issues/863/labels{/name}","comments_url":"https://api.github.com/repos/choderalab/yank/issues/863/comments","events_url":"https://api.github.com/repos/choderalab/yank/issues/863/events","html_url":"https://github.com/choderalab/yank/pull/863","id":284025926,"number":863,"title":"Refactor common ReplicaExchange/SAMS code into MultiStateSampler","user":{"login":"jchodera","id":3656088,"avatar_url":"https://avatars1.githubusercontent.com/u/3656088?v=4","gravatar_id":"","url":"https://api.github.com/users/jchodera","html_url":"https://github.com/jchodera","followers_url":"https://api.github.com/users/jchodera/followers","following_url":"https://api.github.com/users/jchodera/following{/other_user}","gists_url":"https://api.github.com/users/jchodera/gists{/gist_id}","starred_url":"https://api.github.com/users/jchodera/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jchodera/subscriptions","organizations_url":"https://api.github.com/users/jchodera/orgs","repos_url":"https://api.github.com/users/jchodera/repos","events_url":"https://api.github.com/users/jchodera/events{/privacy}","received_events_url":"https://api.github.com/users/jchodera/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":8,"created_at":"2017-12-21T22:46:19Z","updated_at":"2017-12-23T18:39:30Z","closed_at":null,"author_association":"OWNER","pull_request":{"url":"https://api.github.com/repos/choderalab/yank/pulls/863","html_url":"https://github.com/choderalab/yank/pull/863","diff_url":"https://github.com/choderalab/yank/pull/863.diff","patch_url":"https://github.com/choderalab/yank/pull/863.patch"},"body":"This PR moves all the common code that will be shared by `ReplicaExchange` and the forthcoming `SAMS` class into a shared `MultiStateSampler` class that can simulate an arbitrary number of replicas that remain in their initial thermodynamic states.\r\n\r\n- [x] Refactor common code into a `MultiStateSampler` base class\r\n- [x] Update analysis code"},"comment":{"url":"https://api.github.com/repos/choderalab/yank/issues/comments/353741632","html_url":"https://github.com/choderalab/yank/pull/863#issuecomment-353741632","issue_url":"https://api.github.com/repos/choderalab/yank/issues/863","id":353741632,"user":{"login":"jchodera","id":3656088,"avatar_url":"https://avatars1.githubusercontent.com/u/3656088?v=4","gravatar_id":"","url":"https://api.github.com/users/jchodera","html_url":"https://github.com/jchodera","followers_url":"https://api.github.com/users/jchodera/followers","following_url":"https://api.github.com/users/jchodera/following{/other_user}","gists_url":"https://api.github.com/users/jchodera/gists{/gist_id}","starred_url":"https://api.github.com/users/jchodera/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jchodera/subscriptions","organizations_url":"https://api.github.com/users/jchodera/orgs","repos_url":"https://api.github.com/users/jchodera/repos","events_url":"https://api.github.com/users/jchodera/events{/privacy}","received_events_url":"https://api.github.com/users/jchodera/received_events","type":"User","site_admin":false},"created_at":"2017-12-23T18:39:30Z","updated_at":"2017-12-23T18:39:30Z","author_association":"OWNER","body":"Tests pass! Ready for review when you're back at work @Lnaden.\r\n\r\nI know this is already a lot to review (net +300 lines), so I'll wait until this is merged before starting the next phase of SAMS implementation."}}
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