{"action":"created","issue":{"url":"https://api.github.com/repos/brentp/goleft/issues/34","repository_url":"https://api.github.com/repos/brentp/goleft","labels_url":"https://api.github.com/repos/brentp/goleft/issues/34/labels{/name}","comments_url":"https://api.github.com/repos/brentp/goleft/issues/34/comments","events_url":"https://api.github.com/repos/brentp/goleft/issues/34/events","html_url":"https://github.com/brentp/goleft/issues/34","id":264790716,"number":34,"title":"Support for more than one RG?","user":{"login":"drmjc","id":591923,"avatar_url":"https://avatars2.githubusercontent.com/u/591923?v=4","gravatar_id":"","url":"https://api.github.com/users/drmjc","html_url":"https://github.com/drmjc","followers_url":"https://api.github.com/users/drmjc/followers","following_url":"https://api.github.com/users/drmjc/following{/other_user}","gists_url":"https://api.github.com/users/drmjc/gists{/gist_id}","starred_url":"https://api.github.com/users/drmjc/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/drmjc/subscriptions","organizations_url":"https://api.github.com/users/drmjc/orgs","repos_url":"https://api.github.com/users/drmjc/repos","events_url":"https://api.github.com/users/drmjc/events{/privacy}","received_events_url":"https://api.github.com/users/drmjc/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2017-10-12T02:00:56Z","updated_at":"2017-10-12T02:02:39Z","closed_at":null,"author_association":"NONE","body":"Hi @brentp,\r\nLove the indexcov tool! It would be very useful for cancer BAMs, but the limitation of allowing only one @RG record is a blocker for this. We tag each sequencing lane as its own @RG. Is this a restriction that can be lifted?\r\n\r\n> panic: bam reagroup: more than one RG for tumour.bam\r\n\r\ncheers,\r\nMark"},"comment":{"url":"https://api.github.com/repos/brentp/goleft/issues/comments/335998530","html_url":"https://github.com/brentp/goleft/issues/34#issuecomment-335998530","issue_url":"https://api.github.com/repos/brentp/goleft/issues/34","id":335998530,"user":{"login":"brentp","id":1739,"avatar_url":"https://avatars2.githubusercontent.com/u/1739?v=4","gravatar_id":"","url":"https://api.github.com/users/brentp","html_url":"https://github.com/brentp","followers_url":"https://api.github.com/users/brentp/followers","following_url":"https://api.github.com/users/brentp/following{/other_user}","gists_url":"https://api.github.com/users/brentp/gists{/gist_id}","starred_url":"https://api.github.com/users/brentp/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/brentp/subscriptions","organizations_url":"https://api.github.com/users/brentp/orgs","repos_url":"https://api.github.com/users/brentp/repos","events_url":"https://api.github.com/users/brentp/events{/privacy}","received_events_url":"https://api.github.com/users/brentp/received_events","type":"User","site_admin":false},"created_at":"2017-10-12T02:02:39Z","updated_at":"2017-10-12T02:02:39Z","author_association":"OWNER","body":"do they have a single sample name? can you share the header--output of\r\n```\r\nsamtools view -h $bam | grep \"^@RG\"\r\n```\r\n"}}
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