{"action":"created","comment":{"url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/comments/150384623","pull_request_review_id":75932987,"id":150384623,"diff_hunk":"@@ -9,7 +9,11 @@ description = \"\"\"NAMD is a parallel molecular dynamics code designed for high-pe\n toolchain = {'name': 'foss', 'version': '2017a'}\n toolchainopts = {'usempi': True, 'pic': True}\n \n-sources = ['NAMD_%(version)s_Source.tar.gz']\n+sources = [{\n+    'filename': 'NAMD_%(version)s_Source.tar.gz',\n+    'extract_cmd': \"tar xfv %s\",  # source file is actually not gzipped","path":"easybuild/easyconfigs/n/NAMD/NAMD-2.12-foss-2017a-mpi.eb","position":7,"original_position":7,"commit_id":"25e8b04df7204a60ac25d987d1c51987b7ea704a","original_commit_id":"b8eceeac0b153d34ebf75b64f293bbab4df1f46b","user":{"login":"boegel","id":620876,"avatar_url":"https://avatars1.githubusercontent.com/u/620876?v=4","gravatar_id":"","url":"https://api.github.com/users/boegel","html_url":"https://github.com/boegel","followers_url":"https://api.github.com/users/boegel/followers","following_url":"https://api.github.com/users/boegel/following{/other_user}","gists_url":"https://api.github.com/users/boegel/gists{/gist_id}","starred_url":"https://api.github.com/users/boegel/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/boegel/subscriptions","organizations_url":"https://api.github.com/users/boegel/orgs","repos_url":"https://api.github.com/users/boegel/repos","events_url":"https://api.github.com/users/boegel/events{/privacy}","received_events_url":"https://api.github.com/users/boegel/received_events","type":"User","site_admin":false},"body":"... which is exactly what @tovrstra did, thanks. :)","created_at":"2017-11-11T14:19:55Z","updated_at":"2017-11-11T14:19:56Z","html_url":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317#discussion_r150384623","pull_request_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/5317","author_association":"OWNER","_links":{"self":{"href":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/comments/150384623"},"html":{"href":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317#discussion_r150384623"},"pull_request":{"href":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/5317"}},"in_reply_to_id":149942676},"pull_request":{"url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/5317","id":151618247,"html_url":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317","diff_url":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317.diff","patch_url":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317.patch","issue_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/5317","number":5317,"state":"open","locked":false,"title":" Software needed for thesis Sander","user":{"login":"tovrstra","id":99431,"avatar_url":"https://avatars3.githubusercontent.com/u/99431?v=4","gravatar_id":"","url":"https://api.github.com/users/tovrstra","html_url":"https://github.com/tovrstra","followers_url":"https://api.github.com/users/tovrstra/followers","following_url":"https://api.github.com/users/tovrstra/following{/other_user}","gists_url":"https://api.github.com/users/tovrstra/gists{/gist_id}","starred_url":"https://api.github.com/users/tovrstra/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tovrstra/subscriptions","organizations_url":"https://api.github.com/users/tovrstra/orgs","repos_url":"https://api.github.com/users/tovrstra/repos","events_url":"https://api.github.com/users/tovrstra/events{/privacy}","received_events_url":"https://api.github.com/users/tovrstra/received_events","type":"User","site_admin":false},"body":"I have some questions about the NAMD easyconfig:\r\n- The download from the NAMD website (requires login) is a `tar` file and not a `tar.gz` file. Still, the `.gz` extension is present. I've added a comment to reduce the confusion. I hope this is OK.\r\n- Is there a way to change the easyconfig such that it uses `Tcl/8.6.7-GCCcore-6.4.0` instead of `Tcl/8.6.6-intel-2017b`. The former is loaded with Python/3.6.3-intel-2017b and may cause conflicts when loading NAMD afterwards. How should we deal with this?","created_at":"2017-11-09T10:48:43Z","updated_at":"2017-11-11T14:19:56Z","closed_at":null,"merged_at":null,"merge_commit_sha":"772bda0960b9384e73931e1c6260641801cdbb44","assignee":null,"assignees":[],"requested_reviewers":[],"milestone":null,"commits_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/5317/commits","review_comments_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/5317/comments","review_comment_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/comments{/number}","comments_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/5317/comments","statuses_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/statuses/25e8b04df7204a60ac25d987d1c51987b7ea704a","head":{"label":"tovrstra:cmmsoft5","ref":"cmmsoft5","sha":"25e8b04df7204a60ac25d987d1c51987b7ea704a","user":{"login":"tovrstra","id":99431,"avatar_url":"https://avatars3.githubusercontent.com/u/99431?v=4","gravatar_id":"","url":"https://api.github.com/users/tovrstra","html_url":"https://github.com/tovrstra","followers_url":"https://api.github.com/users/tovrstra/followers","following_url":"https://api.github.com/users/tovrstra/following{/other_user}","gists_url":"https://api.github.com/users/tovrstra/gists{/gist_id}","starred_url":"https://api.github.com/users/tovrstra/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tovrstra/subscriptions","organizations_url":"https://api.github.com/users/tovrstra/orgs","repos_url":"https://api.github.com/users/tovrstra/repos","events_url":"https://api.github.com/users/tovrstra/events{/privacy}","received_events_url":"https://api.github.com/users/tovrstra/received_events","type":"User","site_admin":false},"repo":{"id":11193641,"name":"easybuild-easyconfigs","full_name":"tovrstra/easybuild-easyconfigs","owner":{"login":"tovrstra","id":99431,"avatar_url":"https://avatars3.githubusercontent.com/u/99431?v=4","gravatar_id":"","url":"https://api.github.com/users/tovrstra","html_url":"https://github.com/tovrstra","followers_url":"https://api.github.com/users/tovrstra/followers","following_url":"https://api.github.com/users/tovrstra/following{/other_user}","gists_url":"https://api.github.com/users/tovrstra/gists{/gist_id}","starred_url":"https://api.github.com/users/tovrstra/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tovrstra/subscriptions","organizations_url":"https://api.github.com/users/tovrstra/orgs","repos_url":"https://api.github.com/users/tovrstra/repos","events_url":"https://api.github.com/users/tovrstra/events{/privacy}","received_events_url":"https://api.github.com/users/tovrstra/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/tovrstra/easybuild-easyconfigs","description":"A collection of easyconfig files that describe which software to build using which build options with EasyBuild.","fork":true,"url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs","forks_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/forks","keys_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/keys{/key_id}","collaborators_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/teams","hooks_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/hooks","issue_events_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/issues/events{/number}","events_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/events","assignees_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/assignees{/user}","branches_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/branches{/branch}","tags_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/tags","blobs_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/git/refs{/sha}","trees_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/git/trees{/sha}","statuses_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/statuses/{sha}","languages_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/languages","stargazers_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/stargazers","contributors_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/contributors","subscribers_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/subscribers","subscription_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/subscription","commits_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/commits{/sha}","git_commits_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/git/commits{/sha}","comments_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/comments{/number}","issue_comment_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/issues/comments{/number}","contents_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/contents/{+path}","compare_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/compare/{base}...{head}","merges_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/merges","archive_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/downloads","issues_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/issues{/number}","pulls_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/pulls{/number}","milestones_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/milestones{/number}","notifications_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/labels{/name}","releases_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/releases{/id}","deployments_url":"https://api.github.com/repos/tovrstra/easybuild-easyconfigs/deployments","created_at":"2013-07-05T07:03:55Z","updated_at":"2017-07-05T06:46:37Z","pushed_at":"2017-11-09T15:02:55Z","git_url":"git://github.com/tovrstra/easybuild-easyconfigs.git","ssh_url":"git@github.com:tovrstra/easybuild-easyconfigs.git","clone_url":"https://github.com/tovrstra/easybuild-easyconfigs.git","svn_url":"https://github.com/tovrstra/easybuild-easyconfigs","homepage":"http://hpcugent.github.com/easybuild/","size":29932,"stargazers_count":0,"watchers_count":0,"language":"Python","has_issues":false,"has_projects":true,"has_downloads":true,"has_wiki":false,"has_pages":false,"forks_count":0,"mirror_url":null,"archived":false,"open_issues_count":0,"forks":0,"open_issues":0,"watchers":0,"default_branch":"master"}},"base":{"label":"easybuilders:develop","ref":"develop","sha":"8323d38feb34a0e119b5861c6bf6947597638d2e","user":{"login":"easybuilders","id":29568382,"avatar_url":"https://avatars1.githubusercontent.com/u/29568382?v=4","gravatar_id":"","url":"https://api.github.com/users/easybuilders","html_url":"https://github.com/easybuilders","followers_url":"https://api.github.com/users/easybuilders/followers","following_url":"https://api.github.com/users/easybuilders/following{/other_user}","gists_url":"https://api.github.com/users/easybuilders/gists{/gist_id}","starred_url":"https://api.github.com/users/easybuilders/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/easybuilders/subscriptions","organizations_url":"https://api.github.com/users/easybuilders/orgs","repos_url":"https://api.github.com/users/easybuilders/repos","events_url":"https://api.github.com/users/easybuilders/events{/privacy}","received_events_url":"https://api.github.com/users/easybuilders/received_events","type":"Organization","site_admin":false},"repo":{"id":6228403,"name":"easybuild-easyconfigs","full_name":"easybuilders/easybuild-easyconfigs","owner":{"login":"easybuilders","id":29568382,"avatar_url":"https://avatars1.githubusercontent.com/u/29568382?v=4","gravatar_id":"","url":"https://api.github.com/users/easybuilders","html_url":"https://github.com/easybuilders","followers_url":"https://api.github.com/users/easybuilders/followers","following_url":"https://api.github.com/users/easybuilders/following{/other_user}","gists_url":"https://api.github.com/users/easybuilders/gists{/gist_id}","starred_url":"https://api.github.com/users/easybuilders/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/easybuilders/subscriptions","organizations_url":"https://api.github.com/users/easybuilders/orgs","repos_url":"https://api.github.com/users/easybuilders/repos","events_url":"https://api.github.com/users/easybuilders/events{/privacy}","received_events_url":"https://api.github.com/users/easybuilders/received_events","type":"Organization","site_admin":false},"private":false,"html_url":"https://github.com/easybuilders/easybuild-easyconfigs","description":"A collection of easyconfig files that describe which software to build using which build options with EasyBuild.","fork":false,"url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs","forks_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/forks","keys_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/keys{/key_id}","collaborators_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/teams","hooks_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/hooks","issue_events_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/events{/number}","events_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/events","assignees_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/assignees{/user}","branches_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/branches{/branch}","tags_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/tags","blobs_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/git/refs{/sha}","trees_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/git/trees{/sha}","statuses_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/statuses/{sha}","languages_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/languages","stargazers_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/stargazers","contributors_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/contributors","subscribers_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/subscribers","subscription_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/subscription","commits_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/commits{/sha}","git_commits_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/git/commits{/sha}","comments_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/comments{/number}","issue_comment_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/comments{/number}","contents_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/contents/{+path}","compare_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/compare/{base}...{head}","merges_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/merges","archive_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/downloads","issues_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues{/number}","pulls_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls{/number}","milestones_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/milestones{/number}","notifications_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/labels{/name}","releases_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/releases{/id}","deployments_url":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/deployments","created_at":"2012-10-15T14:32:53Z","updated_at":"2017-11-10T21:49:33Z","pushed_at":"2017-11-11T14:04:15Z","git_url":"git://github.com/easybuilders/easybuild-easyconfigs.git","ssh_url":"git@github.com:easybuilders/easybuild-easyconfigs.git","clone_url":"https://github.com/easybuilders/easybuild-easyconfigs.git","svn_url":"https://github.com/easybuilders/easybuild-easyconfigs","homepage":"http://hpcugent.github.com/easybuild/","size":29934,"stargazers_count":80,"watchers_count":80,"language":"Python","has_issues":true,"has_projects":true,"has_downloads":true,"has_wiki":false,"has_pages":false,"forks_count":268,"mirror_url":null,"archived":false,"open_issues_count":650,"forks":268,"open_issues":650,"watchers":80,"default_branch":"master"}},"_links":{"self":{"href":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/5317"},"html":{"href":"https://github.com/easybuilders/easybuild-easyconfigs/pull/5317"},"issue":{"href":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/5317"},"comments":{"href":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/issues/5317/comments"},"review_comments":{"href":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/5317/comments"},"review_comment":{"href":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/pulls/5317/commits"},"statuses":{"href":"https://api.github.com/repos/easybuilders/easybuild-easyconfigs/statuses/25e8b04df7204a60ac25d987d1c51987b7ea704a"}},"author_association":"CONTRIBUTOR"}}
{"actor":{"display_login":"boegel"}}