{"action":"created","issue":{"url":"https://api.github.com/repos/nhejazi/biotmle/issues/23","repository_url":"https://api.github.com/repos/nhejazi/biotmle","labels_url":"https://api.github.com/repos/nhejazi/biotmle/issues/23/labels{/name}","comments_url":"https://api.github.com/repos/nhejazi/biotmle/issues/23/comments","events_url":"https://api.github.com/repos/nhejazi/biotmle/issues/23/events","html_url":"https://github.com/nhejazi/biotmle/issues/23","id":236615612,"number":23,"title":"unit testing","user":{"login":"nhejazi","id":8527276,"avatar_url":"https://avatars3.githubusercontent.com/u/8527276?v=3","gravatar_id":"","url":"https://api.github.com/users/nhejazi","html_url":"https://github.com/nhejazi","followers_url":"https://api.github.com/users/nhejazi/followers","following_url":"https://api.github.com/users/nhejazi/following{/other_user}","gists_url":"https://api.github.com/users/nhejazi/gists{/gist_id}","starred_url":"https://api.github.com/users/nhejazi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nhejazi/subscriptions","organizations_url":"https://api.github.com/users/nhejazi/orgs","repos_url":"https://api.github.com/users/nhejazi/repos","events_url":"https://api.github.com/users/nhejazi/events{/privacy}","received_events_url":"https://api.github.com/users/nhejazi/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"nhejazi","id":8527276,"avatar_url":"https://avatars3.githubusercontent.com/u/8527276?v=3","gravatar_id":"","url":"https://api.github.com/users/nhejazi","html_url":"https://github.com/nhejazi","followers_url":"https://api.github.com/users/nhejazi/followers","following_url":"https://api.github.com/users/nhejazi/following{/other_user}","gists_url":"https://api.github.com/users/nhejazi/gists{/gist_id}","starred_url":"https://api.github.com/users/nhejazi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nhejazi/subscriptions","organizations_url":"https://api.github.com/users/nhejazi/orgs","repos_url":"https://api.github.com/users/nhejazi/repos","events_url":"https://api.github.com/users/nhejazi/events{/privacy}","received_events_url":"https://api.github.com/users/nhejazi/received_events","type":"User","site_admin":false},"assignees":[{"login":"nhejazi","id":8527276,"avatar_url":"https://avatars3.githubusercontent.com/u/8527276?v=3","gravatar_id":"","url":"https://api.github.com/users/nhejazi","html_url":"https://github.com/nhejazi","followers_url":"https://api.github.com/users/nhejazi/followers","following_url":"https://api.github.com/users/nhejazi/following{/other_user}","gists_url":"https://api.github.com/users/nhejazi/gists{/gist_id}","starred_url":"https://api.github.com/users/nhejazi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nhejazi/subscriptions","organizations_url":"https://api.github.com/users/nhejazi/orgs","repos_url":"https://api.github.com/users/nhejazi/repos","events_url":"https://api.github.com/users/nhejazi/events{/privacy}","received_events_url":"https://api.github.com/users/nhejazi/received_events","type":"User","site_admin":false}],"milestone":null,"comments":1,"created_at":"2017-06-16T22:44:34Z","updated_at":"2017-06-22T21:33:18Z","closed_at":null,"body":"now that the JOSS review has begun, it's likely best to finish writing a suite of unit tests to cover all core functions in the package. Aspects of the following should definitely be tested:\r\n\r\n* `biomarkerTMLE_exposure.R`\r\n* `biomarkerTMLE_outcome.R`\r\n* `biomarkertmle.R`\r\n* the S4 class constructor in `biotmle.R`\r\n* functions in `utils_rnaseq.R`\r\n* plotting functions can be ignored for now (perhaps there is a way to exclude them from the coverage report as well, using a feature of the `testthat` package)."},"comment":{"url":"https://api.github.com/repos/nhejazi/biotmle/issues/comments/310508891","html_url":"https://github.com/nhejazi/biotmle/issues/23#issuecomment-310508891","issue_url":"https://api.github.com/repos/nhejazi/biotmle/issues/23","id":310508891,"user":{"login":"nhejazi","id":8527276,"avatar_url":"https://avatars3.githubusercontent.com/u/8527276?v=3","gravatar_id":"","url":"https://api.github.com/users/nhejazi","html_url":"https://github.com/nhejazi","followers_url":"https://api.github.com/users/nhejazi/followers","following_url":"https://api.github.com/users/nhejazi/following{/other_user}","gists_url":"https://api.github.com/users/nhejazi/gists{/gist_id}","starred_url":"https://api.github.com/users/nhejazi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nhejazi/subscriptions","organizations_url":"https://api.github.com/users/nhejazi/orgs","repos_url":"https://api.github.com/users/nhejazi/repos","events_url":"https://api.github.com/users/nhejazi/events{/privacy}","received_events_url":"https://api.github.com/users/nhejazi/received_events","type":"User","site_admin":false},"created_at":"2017-06-22T21:33:18Z","updated_at":"2017-06-22T21:33:18Z","body":"tests for code facilitating statistical analysis can just be adapted from the existing vignette(s)"}}
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