{"action":"created","issue":{"url":"https://api.github.com/repos/ClinGen/clincoded/issues/1328","repository_url":"https://api.github.com/repos/ClinGen/clincoded","labels_url":"https://api.github.com/repos/ClinGen/clincoded/issues/1328/labels{/name}","comments_url":"https://api.github.com/repos/ClinGen/clincoded/issues/1328/comments","events_url":"https://api.github.com/repos/ClinGen/clincoded/issues/1328/events","html_url":"https://github.com/ClinGen/clincoded/issues/1328","id":221104817,"number":1328,"title":"Allowing multiple ID types and free text to represent the disease in the GDM","user":{"login":"wrightmw","id":15131169,"avatar_url":"https://avatars3.githubusercontent.com/u/15131169?v=3","gravatar_id":"","url":"https://api.github.com/users/wrightmw","html_url":"https://github.com/wrightmw","followers_url":"https://api.github.com/users/wrightmw/followers","following_url":"https://api.github.com/users/wrightmw/following{/other_user}","gists_url":"https://api.github.com/users/wrightmw/gists{/gist_id}","starred_url":"https://api.github.com/users/wrightmw/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wrightmw/subscriptions","organizations_url":"https://api.github.com/users/wrightmw/orgs","repos_url":"https://api.github.com/users/wrightmw/repos","events_url":"https://api.github.com/users/wrightmw/events{/privacy}","received_events_url":"https://api.github.com/users/wrightmw/received_events","type":"User","site_admin":false},"labels":[{"id":317121669,"url":"https://api.github.com/repos/ClinGen/clincoded/labels/curator%20review","name":"curator review","color":"e6e6e6","default":false},{"id":389858410,"url":"https://api.github.com/repos/ClinGen/clincoded/labels/gene%20curation%20interface","name":"gene curation interface","color":"c2e0c6","default":false},{"id":239734411,"url":"https://api.github.com/repos/ClinGen/clincoded/labels/priority:%20high","name":"priority: high","color":"FF9000","default":false},{"id":479879823,"url":"https://api.github.com/repos/ClinGen/clincoded/labels/R11","name":"R11","color":"11aaff","default":false}],"state":"open","locked":false,"assignee":{"login":"jimmyzhen","id":6956310,"avatar_url":"https://avatars1.githubusercontent.com/u/6956310?v=3","gravatar_id":"","url":"https://api.github.com/users/jimmyzhen","html_url":"https://github.com/jimmyzhen","followers_url":"https://api.github.com/users/jimmyzhen/followers","following_url":"https://api.github.com/users/jimmyzhen/following{/other_user}","gists_url":"https://api.github.com/users/jimmyzhen/gists{/gist_id}","starred_url":"https://api.github.com/users/jimmyzhen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jimmyzhen/subscriptions","organizations_url":"https://api.github.com/users/jimmyzhen/orgs","repos_url":"https://api.github.com/users/jimmyzhen/repos","events_url":"https://api.github.com/users/jimmyzhen/events{/privacy}","received_events_url":"https://api.github.com/users/jimmyzhen/received_events","type":"User","site_admin":false},"assignees":[{"login":"jimmyzhen","id":6956310,"avatar_url":"https://avatars1.githubusercontent.com/u/6956310?v=3","gravatar_id":"","url":"https://api.github.com/users/jimmyzhen","html_url":"https://github.com/jimmyzhen","followers_url":"https://api.github.com/users/jimmyzhen/followers","following_url":"https://api.github.com/users/jimmyzhen/following{/other_user}","gists_url":"https://api.github.com/users/jimmyzhen/gists{/gist_id}","starred_url":"https://api.github.com/users/jimmyzhen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jimmyzhen/subscriptions","organizations_url":"https://api.github.com/users/jimmyzhen/orgs","repos_url":"https://api.github.com/users/jimmyzhen/repos","events_url":"https://api.github.com/users/jimmyzhen/events{/privacy}","received_events_url":"https://api.github.com/users/jimmyzhen/received_events","type":"User","site_admin":false}],"milestone":null,"comments":11,"created_at":"2017-04-11T23:01:01Z","updated_at":"2017-05-22T17:51:16Z","closed_at":null,"body":"Currently when creating a GDM, a disease can only be identified by an Orphanet ID. This needs to be opened up to include DO, NCIT and OMIM IDs, and when none of these IDs are available then the curator should be able to add free text instead.\r\n\r\n1. In the GDM allow any of the following ID types:\r\nOrphanet\r\nDO\r\nOMIM\r\nNCIt\r\n\r\n<img width=\"1054\" alt=\"screen shot 2017-04-11 at 3 31 38 pm\" src=\"https://cloud.githubusercontent.com/assets/15131169/24933611/0308f364-1ecc-11e7-80cf-08702e32b1e1.png\">\r\n\r\n2. We currently populate the disease name automatically based on the Orphanet ID entered, this functionality will need to be expanded to include pulling in the disease names based on OMIM, DO and NCIt disease names.\r\n\r\n3. If none of the above disease IDs are available then the curator should have the option of clicking a button to add free text. However they must:\r\ni)first enter some sort of confirmation that they have checked all of the ontologies\r\nii)have option of including phenotypes, so another curator can match to it \r\n\r\n<img width=\"838\" alt=\"screen shot 2017-04-11 at 3 47 15 pm\" src=\"https://cloud.githubusercontent.com/assets/15131169/24934039/3e7736de-1ece-11e7-86ab-cd63514b558c.png\">\r\n\r\n4. The curator must have a means of changing the disease once they've entered it\r\n\r\n<img width=\"1071\" alt=\"screen shot 2017-04-11 at 3 59 55 pm\" src=\"https://cloud.githubusercontent.com/assets/15131169/24934363/0810e8e0-1ed0-11e7-8afe-80f522aadf44.png\">"},"comment":{"url":"https://api.github.com/repos/ClinGen/clincoded/issues/comments/303172695","html_url":"https://github.com/ClinGen/clincoded/issues/1328#issuecomment-303172695","issue_url":"https://api.github.com/repos/ClinGen/clincoded/issues/1328","id":303172695,"user":{"login":"selinad","id":11320314,"avatar_url":"https://avatars1.githubusercontent.com/u/11320314?v=3","gravatar_id":"","url":"https://api.github.com/users/selinad","html_url":"https://github.com/selinad","followers_url":"https://api.github.com/users/selinad/followers","following_url":"https://api.github.com/users/selinad/following{/other_user}","gists_url":"https://api.github.com/users/selinad/gists{/gist_id}","starred_url":"https://api.github.com/users/selinad/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/selinad/subscriptions","organizations_url":"https://api.github.com/users/selinad/orgs","repos_url":"https://api.github.com/users/selinad/repos","events_url":"https://api.github.com/users/selinad/events{/privacy}","received_events_url":"https://api.github.com/users/selinad/received_events","type":"User","site_admin":false},"created_at":"2017-05-22T17:51:16Z","updated_at":"2017-05-22T17:51:16Z","body":"@jimmyzhen sorry -- one more thing.  Is there a way to block entry of an OMIA ID?  If not no worries this round.  These are for non-human animals. e.g. OMIA:001260\r\n\r\nHopefully, no one would enter this, but if we can block it, it's always better -- let me know; I can make a ticket for July.\r\n\r\n@wrightmw we are going to need to create help documentation for using MonDO..."}}
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