{"action":"created","comment":{"url":"https://api.github.com/repos/biosistemika/scinote-web/pulls/comments/142147313","pull_request_review_id":66465594,"id":142147313,"diff_hunk":"@@ -658,194 +822,286 @@ def export\n \n   def unlink_modal\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n-          title: t(\"my_modules.protocols.confirm_link_update_modal.unlink_title\"),\n-          message: t(\"my_modules.protocols.confirm_link_update_modal.unlink_message\"),\n-          btn_text: t(\"my_modules.protocols.confirm_link_update_modal.unlink_btn_text\"),\n+          title: t('my_modules.protocols.confirm_link_update_modal.unlink_title'),\n+          message: t('my_modules.protocols.confirm_link_update_modal.unlink_message'),\n+          btn_text: t('my_modules.protocols.confirm_link_update_modal.unlink_btn_text'),\n           url: unlink_protocol_path(@protocol)\n         }\n-      }\n+      end\n     end\n   end\n \n   def revert_modal\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n-          title: t(\"my_modules.protocols.confirm_link_update_modal.revert_title\"),\n-          message: t(\"my_modules.protocols.confirm_link_update_modal.revert_message\"),\n-          btn_text: t(\"my_modules.protocols.confirm_link_update_modal.revert_btn_text\"),\n+          title: t('my_modules.protocols.confirm_link_update_modal.revert_title'),\n+          message: t('my_modules.protocols.confirm_link_update_modal.revert_message'),\n+          btn_text: t('my_modules.protocols.confirm_link_update_modal.revert_btn_text'),\n           url: revert_protocol_path(@protocol)\n         }\n-      }\n+      end\n     end\n   end\n \n   def update_parent_modal\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n-          title: t(\"my_modules.protocols.confirm_link_update_modal.update_parent_title\"),\n-          message: t(\"my_modules.protocols.confirm_link_update_modal.update_parent_message\"),\n-          btn_text: t(\"general.update\"),\n+          title: t('my_modules.protocols.confirm_link_update_modal.update_parent_title'),\n+          message: t('my_modules.protocols.confirm_link_update_modal.update_parent_message'),\n+          btn_text: t('general.update'),\n           url: update_parent_protocol_path(@protocol)\n         }\n-      }\n+      end\n     end\n   end\n \n   def update_from_parent_modal\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n-          title: t(\"my_modules.protocols.confirm_link_update_modal.update_self_title\"),\n-          message: t(\"my_modules.protocols.confirm_link_update_modal.update_self_message\"),\n-          btn_text: t(\"general.update\"),\n+          title: t('my_modules.protocols.confirm_link_update_modal.update_self_title'),\n+          message: t('my_modules.protocols.confirm_link_update_modal.update_self_message'),\n+          btn_text: t('general.update'),\n           url: update_from_parent_protocol_path(@protocol)\n         }\n-      }\n+      end\n     end\n   end\n \n   def load_from_repository_datatable\n     @protocol = Protocol.find_by_id(params[:id])\n-    @type = (params[:type] || \"public\").to_sym\n+    @type = (params[:type] || 'public').to_sym\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: ::LoadFromRepositoryProtocolsDatatable.new(\n           view_context,\n           @protocol.team,\n           @type,\n           current_user\n         )\n-      }\n+      end\n     end\n   end\n \n   def load_from_repository_modal\n     @protocol = Protocol.find_by_id(params[:id])\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n-          html: render_to_string({\n-            partial: \"my_modules/protocols/load_from_repository_modal_body.html.erb\"\n-          })\n+          html: render_to_string(partial: 'my_modules/protocols/load_from_repository_modal_body.html.erb')\n         }\n-      }\n+      end\n     end\n   end\n \n   def copy_to_repository_modal\n     @new = Protocol.new\n     @original = Protocol.find(params[:id])\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n-          html: render_to_string({\n-            partial: \"my_modules/protocols/copy_to_repository_modal_body.html.erb\"\n-          })\n+          html: render_to_string(partial: 'my_modules/protocols/copy_to_repository_modal_body.html.erb')\n         }\n-      }\n+      end\n     end\n   end\n \n   def protocol_status_bar\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n-          html: render_to_string({\n-            partial: \"my_modules/protocols/protocol_status_bar.html.erb\"\n-          })\n+          html: render_to_string(partial: 'my_modules/protocols/protocol_status_bar.html.erb')\n         }\n-      }\n+      end\n     end\n   end\n \n   def updated_at_label\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n-          html: render_to_string({\n-            partial: \"protocols/header/updated_at_label.html.erb\"\n-          })\n+          html: render_to_string(partial: 'protocols/header/updated_at_label.html.erb')\n         }\n-      }\n+      end\n     end\n   end\n \n   def create_new_modal\n     @new_protocol = Protocol.new\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n-          html: render_to_string({\n-            partial: \"protocols/index/create_new_modal_body.html.erb\"\n-          })\n+          html: render_to_string(partial: 'protocols/index/create_new_modal_body.html.erb')\n         }\n-      }\n+      end\n     end\n   end\n \n   def edit_name_modal\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n           title: I18n.t('protocols.header.edit_name_modal.title',\n                         protocol: escape_input(@protocol.name)),\n-          html: render_to_string({\n-            partial: \"protocols/header/edit_name_modal_body.html.erb\"\n-          })\n+          html: render_to_string(partial: 'protocols/header/edit_name_modal_body.html.erb')\n         }\n-      }\n+      end\n     end\n   end\n \n   def edit_keywords_modal\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n           title: I18n.t('protocols.header.edit_keywords_modal.title',\n                         protocol: escape_input(@protocol.name)),\n-          html: render_to_string({\n-            partial: \"protocols/header/edit_keywords_modal_body.html.erb\"\n-          }),\n+          html: render_to_string(partial: 'protocols/header/edit_keywords_modal_body.html.erb'),\n           keywords: @protocol.team.protocol_keywords_list\n         }\n-      }\n+      end\n     end\n   end\n \n   def edit_authors_modal\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n           title: I18n.t('protocols.header.edit_authors_modal.title',\n                         protocol: escape_input(@protocol.name)),\n-          html: render_to_string({\n-            partial: \"protocols/header/edit_authors_modal_body.html.erb\"\n-          })\n+          html: render_to_string(partial: 'protocols/header/edit_authors_modal_body.html.erb')\n         }\n-      }\n+      end\n     end\n   end\n \n   def edit_description_modal\n     respond_to do |format|\n-      format.json {\n+      format.json do\n         render json: {\n           title: I18n.t('protocols.header.edit_description_modal.title',\n                         protocol: escape_input(@protocol.name)),\n-          html: render_to_string({\n-            partial: \"protocols/header/edit_description_modal_body.html.erb\"\n-          })\n+          html: render_to_string(partial: 'protocols/header/edit_description_modal_body.html.erb')\n         }\n-      }\n+      end\n     end\n   end\n \n   private\n \n+  def protocolsio_step_description_populate(result, iterating_key, pos2)\n+    if !iterating_key['data'].nil? && iterating_key['data'] != '' &&\n+       result['steps'][pos2.to_s]['description']\n+      append = '<br>' + iterating_key['data'] + '<br>'\n+      result['steps'][pos2.to_s]['description'] << append\n+    elsif !result['steps'][pos2.to_s]['description']\n+      append = '<br>' + iterating_key['data'] + '<br>'\n+      result['steps'][pos2.to_s]['description'] = append\n+    else\n+      result['steps'][pos2.to_s]['description'] = 'Description missing'\n+    end\n+    result\n+  end\n+\n+  def protocolsio_step_title_populate(result, iterating_key, pos2)\n+    result['steps'][pos2.to_s]['name'] =\n+      if !iterating_key['data'].nil? && iterating_key['data'] != ''\n+        iterating_key['data']\n+      else\n+        'Step'\n+      end\n+    result\n+  end\n+\n+  def protocolsio_step_expected_result_populate(result, iterating_key, pos2)\n+    if !iterating_key['data'].nil? && iterating_key['data'] != ''\n+      append = '<br><strong>Expected result: </strong>'\n+      + iterating_key['data'] + '<br>'\n+      result['steps'][pos2.to_s]['description'] << append\n+    end\n+    result\n+  end\n+\n+  def protocolsio_step_software_package_populate(result, iterating_key, pos2)\n+    if iterating_key['source_data']['name'] &&\n+       iterating_key['source_data']['developer'] &&\n+       iterating_key['source_data']['version'] &&\n+       iterating_key['source_data']['link'] &&\n+       iterating_key['source_data']['repository'] &&\n+       iterating_key['source_data']['os_name'] &&\n+       iterating_key['source_data']['os_version']\n+      append = '<br><strong>Software package: </strong>' +\n+               iterating_key['source_data']['name'] + '<br>Developer: ' +\n+               iterating_key['source_data']['developer'] + '<br>Version: ' +\n+               iterating_key['source_data']['version'] + '<br>Link: ' +\n+               iterating_key['source_data']['link'] + '<br>Repository: ' +\n+               iterating_key['source_data']['repository'] +\n+               '<br>OS name , OS version: ' +\n+               iterating_key['source_data']['os_name'] + ' , ' +\n+               iterating_key['source_data']['os_version']\n+      result['steps'][pos2.to_s]['description'] << append\n+    end\n+    result\n+  end\n+\n+  def protocolsio_step_dataset_populate(result, iterating_key, pos2)\n+    if iterating_key['source_data']['name'] &&\n+       iterating_key['source_data']['link']\n+      append = '<br><strong>Dataset: </strong>' +\n+               iterating_key['source_data']['name'] + '<br>Link: ' +\n+               iterating_key['source_data']['link']\n+      result['steps'][pos2.to_s]['description'] << append\n+    end\n+    result\n+  end\n+\n+  def protocolsio_step_command_populate(result, iterating_key, pos2)\n+    if iterating_key['source_data']['name'] &&\n+       iterating_key['source_data']['description'] &&\n+       iterating_key['source_data']['os_name'] &&\n+       iterating_key['source_data']['os_version']\n+      append = '<br><strong>Command: </strong>' +\n+               iterating_key['source_data']['name'] +\n+               '<br>Description: ' 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