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popV
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tabula_sapiens_Immune

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popV
biology
genomics
single-cell
anndata_version:0.11.3
python_version:3.11.11
tissue: diverse
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@@ -5,7 +5,8 @@ tags:
5
  - biology
6
  - genomics
7
  - single-cell
8
- - anndata_version:0.11.1
 
9
  - popV
10
  - 'tissue: diverse'
11
  ---
@@ -31,49 +32,49 @@ computed on a 10% random subset of the data that was not used for training.
31
 
32
  | Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
33
  | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
34
- | B cell | 11244 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.99 | 0.99 |
35
- | CD4-positive, alpha-beta T cell | 9706 | 0.58 | 0.80 | 0.82 | 0.77 | 0.00 | 0.52 | 0.44 | 0.59 | 0.79 |
36
- | CD8-positive, alpha-beta T cell | 7625 | 0.73 | 0.80 | 0.81 | 0.76 | 0.00 | 0.73 | 0.55 | 0.66 | 0.80 |
37
- | neutrophil | 6998 | 0.96 | 0.99 | 0.97 | 0.98 | 0.00 | 0.92 | 0.95 | 0.95 | 0.98 |
38
- | macrophage | 6805 | 0.84 | 0.85 | 0.91 | 0.83 | 0.00 | 0.69 | 0.74 | 0.76 | 0.89 |
39
- | plasma cell | 2788 | 0.99 | 0.99 | 0.97 | 0.98 | 0.00 | 0.97 | 0.98 | 0.98 | 0.99 |
40
- | monocyte | 2612 | 0.54 | 0.43 | 0.76 | 0.46 | 0.00 | 0.31 | 0.44 | 0.55 | 0.63 |
41
- | classical monocyte | 1807 | 0.62 | 0.63 | 0.75 | 0.50 | 0.00 | 0.51 | 0.56 | 0.66 | 0.70 |
42
- | erythrocyte | 1501 | 0.96 | 0.97 | 0.97 | 0.98 | 0.00 | 0.97 | 0.97 | 0.97 | 0.97 |
43
- | natural killer cell | 1417 | 0.73 | 0.74 | 0.76 | 0.71 | 0.00 | 0.72 | 0.68 | 0.72 | 0.75 |
44
- | naive thymus-derived CD4-positive, alpha-beta T cell | 996 | 0.19 | 0.07 | 0.27 | 0.08 | 0.00 | 0.21 | 0.21 | 0.31 | 0.22 |
45
- | T cell | 593 | 0.48 | 0.33 | 0.54 | 0.17 | 0.00 | 0.24 | 0.31 | 0.42 | 0.52 |
46
- | mast cell | 589 | 0.86 | 0.84 | 0.92 | 0.82 | 0.00 | 0.87 | 0.92 | 0.90 | 0.93 |
47
- | intermediate monocyte | 546 | 0.32 | 0.14 | 0.54 | 0.15 | 0.00 | 0.22 | 0.31 | 0.44 | 0.48 |
48
- | mature NK T cell | 540 | 0.55 | 0.57 | 0.63 | 0.49 | 0.00 | 0.50 | 0.36 | 0.51 | 0.63 |
49
- | mononuclear phagocyte | 556 | 0.66 | 0.00 | 0.77 | 0.12 | 0.00 | 0.01 | 0.60 | 0.57 | 0.65 |
50
- | CD4-positive, alpha-beta thymocyte | 462 | 0.40 | 0.07 | 0.60 | 0.30 | 0.00 | 0.40 | 0.35 | 0.43 | 0.60 |
51
- | regulatory T cell | 296 | 0.27 | 0.04 | 0.35 | 0.12 | 0.00 | 0.24 | 0.29 | 0.40 | 0.48 |
52
- | hematopoietic precursor cell | 211 | 0.53 | 0.67 | 0.79 | 0.66 | 0.00 | 0.42 | 0.51 | 0.61 | 0.72 |
53
- | gamma-delta T cell | 192 | 0.52 | 0.35 | 0.78 | 0.27 | 0.00 | 0.62 | 0.61 | 0.50 | 0.78 |
54
- | basophil | 164 | 0.65 | 0.02 | 0.82 | 0.30 | 0.00 | 0.67 | 0.66 | 0.76 | 0.83 |
55
- | tissue-resident macrophage | 128 | 0.74 | 0.00 | 0.81 | 0.21 | 0.00 | 0.34 | 0.65 | 0.52 | 0.78 |
56
- | non-classical monocyte | 113 | 0.30 | 0.39 | 0.45 | 0.04 | 0.00 | 0.27 | 0.21 | 0.35 | 0.49 |
57
- | activated CD8-positive, alpha-beta T cell | 116 | 0.32 | 0.02 | 0.37 | 0.06 | 0.00 | 0.05 | 0.24 | 0.33 | 0.39 |
58
- | naive thymus-derived CD8-positive, alpha-beta T cell | 110 | 0.12 | 0.00 | 0.38 | 0.07 | 0.00 | 0.17 | 0.12 | 0.15 | 0.21 |
59
- | myeloid leukocyte | 92 | 0.27 | 0.02 | 0.62 | 0.15 | 0.00 | 0.07 | 0.21 | 0.24 | 0.48 |
60
- | erythroid progenitor cell | 106 | 0.64 | 0.63 | 0.68 | 0.61 | 0.00 | 0.64 | 0.69 | 0.70 | 0.73 |
61
- | innate lymphoid cell | 85 | 0.20 | 0.18 | 0.31 | 0.34 | 0.00 | 0.25 | 0.20 | 0.23 | 0.35 |
62
- | hematopoietic stem cell | 72 | 0.72 | 0.67 | 0.77 | 0.66 | 0.00 | 0.76 | 0.73 | 0.76 | 0.80 |
63
- | granulocyte | 70 | 0.37 | 0.00 | 0.59 | 0.39 | 0.00 | 0.13 | 0.25 | 0.24 | 0.57 |
64
- | CD8-positive, alpha-beta thymocyte | 70 | 0.45 | 0.03 | 0.44 | 0.36 | 0.00 | 0.35 | 0.21 | 0.35 | 0.66 |
65
- | activated CD4-positive, alpha-beta T cell | 60 | 0.04 | 0.00 | 0.24 | 0.03 | 0.00 | 0.15 | 0.09 | 0.13 | 0.19 |
66
- | myeloid dendritic cell | 47 | 0.13 | 0.22 | 0.35 | 0.16 | 0.00 | 0.10 | 0.14 | 0.18 | 0.21 |
67
- | platelet | 51 | 0.59 | 0.92 | 0.97 | 0.95 | 0.00 | 0.60 | 0.81 | 0.76 | 0.88 |
68
- | common myeloid progenitor | 39 | 0.57 | 0.53 | 0.72 | 0.41 | 0.00 | 0.58 | 0.58 | 0.79 | 0.77 |
69
- | thymocyte | 49 | 0.00 | 0.00 | 0.48 | 0.41 | 0.00 | 0.53 | 0.25 | 0.44 | 0.83 |
70
- | microglial cell | 30 | 0.13 | 0.00 | 0.41 | 0.10 | 0.00 | 0.09 | 0.14 | 0.16 | 0.29 |
71
- | colon macrophage | 41 | 0.30 | 0.00 | 0.76 | 0.08 | 0.00 | 0.04 | 0.23 | 0.35 | 0.67 |
72
- | leukocyte | 15 | 0.13 | 0.00 | 0.05 | 0.11 | 0.00 | 0.13 | 0.04 | 0.12 | 0.21 |
73
- | plasmacytoid dendritic cell | 7 | 0.46 | 0.25 | 0.40 | 0.17 | 0.00 | 0.06 | 0.32 | 0.20 | 0.44 |
74
- | hematopoietic cell | 8 | 0.93 | 0.22 | 0.77 | 0.71 | 0.00 | 0.08 | 0.88 | 0.59 | 0.89 |
75
- | myeloid cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.10 | 0.10 | 0.00 |
76
- | Langerhans cell | 7 | 0.00 | 0.25 | 0.67 | 0.15 | 0.00 | 0.29 | 0.31 | 0.28 | 0.88 |
77
  | T follicular helper cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
78
  | erythroid lineage cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
79
 
@@ -81,51 +82,51 @@ The train accuracies are computed on the training data.
81
 
82
  | Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
83
  | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
84
- | B cell | 103230 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.99 | 0.99 |
85
- | CD4-positive, alpha-beta T cell | 87382 | 0.59 | 0.79 | 0.87 | 0.81 | 0.00 | 0.56 | 0.45 | 0.59 | 0.82 |
86
- | CD8-positive, alpha-beta T cell | 68598 | 0.73 | 0.78 | 0.87 | 0.82 | 0.00 | 0.71 | 0.55 | 0.67 | 0.82 |
87
- | neutrophil | 62513 | 0.96 | 0.98 | 0.98 | 0.98 | 0.00 | 0.93 | 0.95 | 0.95 | 0.98 |
88
- | macrophage | 62189 | 0.84 | 0.84 | 0.94 | 0.88 | 0.00 | 0.73 | 0.74 | 0.76 | 0.92 |
89
- | plasma cell | 24549 | 0.98 | 0.98 | 0.98 | 0.98 | 0.00 | 0.97 | 0.98 | 0.98 | 0.99 |
90
- | monocyte | 23136 | 0.54 | 0.34 | 0.85 | 0.67 | 0.00 | 0.56 | 0.46 | 0.56 | 0.72 |
91
- | classical monocyte | 16392 | 0.63 | 0.59 | 0.84 | 0.70 | 0.00 | 0.67 | 0.57 | 0.67 | 0.78 |
92
- | erythrocyte | 13107 | 0.96 | 0.97 | 0.98 | 0.99 | 0.00 | 0.97 | 0.97 | 0.97 | 0.98 |
93
- | natural killer cell | 12811 | 0.73 | 0.74 | 0.85 | 0.80 | 0.00 | 0.74 | 0.70 | 0.73 | 0.77 |
94
- | naive thymus-derived CD4-positive, alpha-beta T cell | 8831 | 0.22 | 0.05 | 0.46 | 0.22 | 0.00 | 0.26 | 0.24 | 0.32 | 0.33 |
95
- | T cell | 5693 | 0.51 | 0.27 | 0.69 | 0.38 | 0.00 | 0.35 | 0.36 | 0.46 | 0.61 |
96
- | mast cell | 5626 | 0.86 | 0.86 | 0.95 | 0.92 | 0.00 | 0.94 | 0.92 | 0.92 | 0.95 |
97
- | intermediate monocyte | 4931 | 0.34 | 0.11 | 0.69 | 0.43 | 0.00 | 0.31 | 0.35 | 0.46 | 0.55 |
98
- | mature NK T cell | 4850 | 0.55 | 0.51 | 0.74 | 0.61 | 0.00 | 0.55 | 0.39 | 0.50 | 0.64 |
99
- | mononuclear phagocyte | 4780 | 0.66 | 0.00 | 0.92 | 0.48 | 0.00 | 0.90 | 0.58 | 0.56 | 0.91 |
100
- | CD4-positive, alpha-beta thymocyte | 4223 | 0.41 | 0.02 | 0.72 | 0.43 | 0.00 | 0.66 | 0.39 | 0.47 | 0.71 |
101
- | regulatory T cell | 2353 | 0.24 | 0.03 | 0.56 | 0.27 | 0.00 | 0.25 | 0.27 | 0.38 | 0.49 |
102
- | hematopoietic precursor cell | 1929 | 0.54 | 0.63 | 0.85 | 0.78 | 0.00 | 0.44 | 0.59 | 0.63 | 0.76 |
103
- | gamma-delta T cell | 1784 | 0.54 | 0.31 | 0.85 | 0.51 | 0.00 | 0.60 | 0.61 | 0.51 | 0.80 |
104
- | basophil | 1505 | 0.64 | 0.01 | 0.88 | 0.76 | 0.00 | 0.86 | 0.69 | 0.81 | 0.90 |
105
- | tissue-resident macrophage | 1219 | 0.72 | 0.00 | 0.88 | 0.66 | 0.00 | 0.66 | 0.67 | 0.54 | 0.80 |
106
- | non-classical monocyte | 1171 | 0.31 | 0.32 | 0.57 | 0.35 | 0.00 | 0.30 | 0.30 | 0.41 | 0.57 |
107
- | activated CD8-positive, alpha-beta T cell | 1026 | 0.36 | 0.00 | 0.50 | 0.12 | 0.00 | 0.43 | 0.28 | 0.35 | 0.70 |
108
- | naive thymus-derived CD8-positive, alpha-beta T cell | 946 | 0.12 | 0.00 | 0.62 | 0.33 | 0.00 | 0.18 | 0.13 | 0.16 | 0.25 |
109
- | myeloid leukocyte | 902 | 0.26 | 0.00 | 0.73 | 0.30 | 0.00 | 0.26 | 0.25 | 0.28 | 0.66 |
110
- | erythroid progenitor cell | 865 | 0.65 | 0.55 | 0.82 | 0.82 | 0.00 | 0.67 | 0.78 | 0.74 | 0.79 |
111
- | innate lymphoid cell | 886 | 0.21 | 0.09 | 0.56 | 0.48 | 0.00 | 0.44 | 0.25 | 0.27 | 0.45 |
112
- | hematopoietic stem cell | 786 | 0.73 | 0.71 | 0.85 | 0.79 | 0.00 | 0.79 | 0.83 | 0.87 | 0.87 |
113
- | granulocyte | 699 | 0.37 | 0.00 | 0.74 | 0.63 | 0.00 | 0.21 | 0.28 | 0.28 | 0.72 |
114
- | CD8-positive, alpha-beta thymocyte | 661 | 0.40 | 0.01 | 0.58 | 0.46 | 0.00 | 0.51 | 0.28 | 0.43 | 0.77 |
115
- | activated CD4-positive, alpha-beta T cell | 512 | 0.05 | 0.00 | 0.47 | 0.23 | 0.00 | 0.27 | 0.12 | 0.13 | 0.29 |
116
- | myeloid dendritic cell | 521 | 0.14 | 0.06 | 0.56 | 0.41 | 0.00 | 0.15 | 0.21 | 0.24 | 0.32 |
117
- | platelet | 443 | 0.66 | 0.85 | 0.96 | 0.96 | 0.00 | 0.64 | 0.86 | 0.80 | 0.90 |
118
- | common myeloid progenitor | 417 | 0.53 | 0.43 | 0.82 | 0.75 | 0.00 | 0.72 | 0.84 | 0.90 | 0.89 |
119
- | thymocyte | 406 | 0.00 | 0.00 | 0.57 | 0.48 | 0.00 | 0.58 | 0.27 | 0.56 | 0.91 |
120
- | microglial cell | 357 | 0.15 | 0.00 | 0.60 | 0.25 | 0.00 | 0.30 | 0.22 | 0.25 | 0.48 |
121
- | colon macrophage | 286 | 0.22 | 0.00 | 0.81 | 0.37 | 0.00 | 0.10 | 0.21 | 0.38 | 0.77 |
122
- | leukocyte | 171 | 0.10 | 0.00 | 0.48 | 0.24 | 0.00 | 0.35 | 0.14 | 0.17 | 0.43 |
123
- | plasmacytoid dendritic cell | 91 | 0.56 | 0.36 | 0.78 | 0.56 | 0.00 | 0.15 | 0.57 | 0.55 | 0.68 |
124
- | hematopoietic cell | 90 | 0.86 | 0.00 | 0.97 | 0.72 | 0.00 | 0.10 | 0.98 | 0.68 | 0.87 |
125
- | myeloid cell | 79 | 0.00 | 0.00 | 0.39 | 0.10 | 0.00 | 0.18 | 0.32 | 0.28 | 0.82 |
126
- | Langerhans cell | 69 | 0.00 | 0.03 | 0.78 | 0.57 | 0.00 | 0.30 | 0.30 | 0.31 | 0.70 |
127
- | T follicular helper cell | 6 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.03 | 1.00 | 0.71 | 0.91 |
128
- | erythroid lineage cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.04 | 1.00 | 0.80 | 0.00 |
129
 
130
  </details>
131
 
 
5
  - biology
6
  - genomics
7
  - single-cell
8
+ - anndata_version:0.11.3
9
+ - python_version:3.11.11
10
  - popV
11
  - 'tissue: diverse'
12
  ---
 
32
 
33
  | Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
34
  | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
35
+ | B cell | 11271 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.99 | 0.99 |
36
+ | CD4-positive, alpha-beta T cell | 9705 | 0.53 | 0.80 | 0.82 | 0.76 | 0.00 | 0.45 | 0.41 | 0.60 | 0.79 |
37
+ | CD8-positive, alpha-beta T cell | 7644 | 0.71 | 0.79 | 0.81 | 0.75 | 0.00 | 0.74 | 0.56 | 0.65 | 0.81 |
38
+ | neutrophil | 6976 | 0.94 | 0.98 | 0.98 | 0.98 | 0.00 | 0.91 | 0.95 | 0.95 | 0.98 |
39
+ | macrophage | 6803 | 0.82 | 0.85 | 0.91 | 0.84 | 0.00 | 0.70 | 0.73 | 0.75 | 0.90 |
40
+ | plasma cell | 2783 | 0.97 | 0.98 | 0.98 | 0.98 | 0.00 | 0.98 | 0.98 | 0.98 | 0.99 |
41
+ | monocyte | 2609 | 0.56 | 0.40 | 0.76 | 0.43 | 0.00 | 0.30 | 0.48 | 0.55 | 0.61 |
42
+ | classical monocyte | 1806 | 0.63 | 0.63 | 0.74 | 0.51 | 0.00 | 0.57 | 0.56 | 0.67 | 0.71 |
43
+ | erythrocyte | 1496 | 0.96 | 0.97 | 0.97 | 0.98 | 0.00 | 0.96 | 0.97 | 0.97 | 0.98 |
44
+ | natural killer cell | 1409 | 0.71 | 0.74 | 0.76 | 0.70 | 0.00 | 0.73 | 0.66 | 0.72 | 0.75 |
45
+ | naive thymus-derived CD4-positive, alpha-beta T cell | 1002 | 0.23 | 0.07 | 0.28 | 0.09 | 0.00 | 0.22 | 0.21 | 0.32 | 0.32 |
46
+ | T cell | 606 | 0.40 | 0.32 | 0.55 | 0.15 | 0.00 | 0.24 | 0.32 | 0.46 | 0.55 |
47
+ | mast cell | 575 | 0.84 | 0.85 | 0.95 | 0.84 | 0.00 | 0.90 | 0.89 | 0.89 | 0.94 |
48
+ | intermediate monocyte | 550 | 0.27 | 0.14 | 0.54 | 0.14 | 0.00 | 0.26 | 0.31 | 0.43 | 0.44 |
49
+ | mature NK T cell | 536 | 0.46 | 0.55 | 0.61 | 0.41 | 0.00 | 0.49 | 0.38 | 0.45 | 0.60 |
50
+ | mononuclear phagocyte | 554 | 0.58 | 0.00 | 0.77 | 0.13 | 0.00 | 0.01 | 0.61 | 0.59 | 0.65 |
51
+ | CD4-positive, alpha-beta thymocyte | 461 | 0.40 | 0.03 | 0.58 | 0.27 | 0.00 | 0.29 | 0.32 | 0.44 | 0.56 |
52
+ | regulatory T cell | 293 | 0.30 | 0.05 | 0.38 | 0.11 | 0.00 | 0.26 | 0.27 | 0.38 | 0.50 |
53
+ | hematopoietic precursor cell | 209 | 0.50 | 0.66 | 0.78 | 0.66 | 0.00 | 0.53 | 0.49 | 0.57 | 0.71 |
54
+ | gamma-delta T cell | 193 | 0.64 | 0.35 | 0.76 | 0.18 | 0.00 | 0.48 | 0.59 | 0.49 | 0.77 |
55
+ | basophil | 166 | 0.47 | 0.08 | 0.91 | 0.42 | 0.00 | 0.69 | 0.60 | 0.73 | 0.84 |
56
+ | tissue-resident macrophage | 128 | 0.72 | 0.00 | 0.84 | 0.20 | 0.00 | 0.24 | 0.62 | 0.53 | 0.74 |
57
+ | non-classical monocyte | 113 | 0.09 | 0.36 | 0.47 | 0.06 | 0.00 | 0.26 | 0.22 | 0.32 | 0.52 |
58
+ | activated CD8-positive, alpha-beta T cell | 113 | 0.40 | 0.00 | 0.26 | 0.07 | 0.00 | 0.09 | 0.26 | 0.32 | 0.38 |
59
+ | naive thymus-derived CD8-positive, alpha-beta T cell | 112 | 0.13 | 0.00 | 0.42 | 0.06 | 0.00 | 0.18 | 0.12 | 0.15 | 0.25 |
60
+ | myeloid leukocyte | 96 | 0.29 | 0.00 | 0.65 | 0.07 | 0.00 | 0.05 | 0.22 | 0.24 | 0.46 |
61
+ | erythroid progenitor cell | 106 | 0.58 | 0.64 | 0.74 | 0.63 | 0.00 | 0.56 | 0.62 | 0.68 | 0.74 |
62
+ | innate lymphoid cell | 84 | 0.23 | 0.19 | 0.31 | 0.22 | 0.00 | 0.22 | 0.20 | 0.22 | 0.32 |
63
+ | hematopoietic stem cell | 72 | 0.69 | 0.73 | 0.80 | 0.70 | 0.00 | 0.71 | 0.75 | 0.80 | 0.81 |
64
+ | granulocyte | 69 | 0.18 | 0.03 | 0.65 | 0.34 | 0.00 | 0.08 | 0.28 | 0.31 | 0.49 |
65
+ | CD8-positive, alpha-beta thymocyte | 70 | 0.49 | 0.00 | 0.43 | 0.19 | 0.00 | 0.49 | 0.28 | 0.35 | 0.68 |
66
+ | activated CD4-positive, alpha-beta T cell | 60 | 0.07 | 0.00 | 0.22 | 0.00 | 0.00 | 0.11 | 0.11 | 0.13 | 0.21 |
67
+ | myeloid dendritic cell | 44 | 0.15 | 0.24 | 0.41 | 0.36 | 0.00 | 0.14 | 0.14 | 0.15 | 0.23 |
68
+ | platelet | 53 | 0.60 | 0.92 | 0.96 | 0.93 | 0.00 | 0.60 | 0.82 | 0.76 | 0.90 |
69
+ | common myeloid progenitor | 39 | 0.23 | 0.54 | 0.69 | 0.35 | 0.00 | 0.50 | 0.62 | 0.73 | 0.65 |
70
+ | thymocyte | 43 | 0.00 | 0.00 | 0.43 | 0.33 | 0.00 | 0.26 | 0.22 | 0.49 | 0.82 |
71
+ | microglial cell | 34 | 0.02 | 0.00 | 0.40 | 0.05 | 0.00 | 0.07 | 0.12 | 0.14 | 0.22 |
72
+ | colon macrophage | 41 | 0.31 | 0.00 | 0.74 | 0.04 | 0.00 | 0.04 | 0.28 | 0.38 | 0.64 |
73
+ | leukocyte | 15 | 0.12 | 0.00 | 0.05 | 0.11 | 0.00 | 0.05 | 0.04 | 0.13 | 0.21 |
74
+ | plasmacytoid dendritic cell | 7 | 0.00 | 0.00 | 0.36 | 0.18 | 0.00 | 0.06 | 0.24 | 0.27 | 0.42 |
75
+ | hematopoietic cell | 8 | 0.00 | 0.22 | 0.77 | 0.59 | 0.00 | 0.15 | 1.00 | 0.41 | 0.84 |
76
+ | myeloid cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.29 | 0.18 | 0.04 | 0.50 |
77
+ | Langerhans cell | 7 | 0.54 | 0.36 | 0.62 | 0.18 | 0.00 | 0.23 | 0.35 | 0.22 | 0.78 |
78
  | T follicular helper cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
79
  | erythroid lineage cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
80
 
 
82
 
83
  | Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
84
  | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
85
+ | B cell | 103201 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |
86
+ | CD4-positive, alpha-beta T cell | 87384 | 0.53 | 0.79 | 0.87 | 0.81 | 0.00 | 0.48 | 0.41 | 0.59 | 0.81 |
87
+ | CD8-positive, alpha-beta T cell | 68580 | 0.71 | 0.78 | 0.87 | 0.81 | 0.00 | 0.74 | 0.56 | 0.66 | 0.82 |
88
+ | neutrophil | 62535 | 0.95 | 0.98 | 0.98 | 0.98 | 0.00 | 0.91 | 0.95 | 0.95 | 0.98 |
89
+ | macrophage | 62188 | 0.82 | 0.84 | 0.94 | 0.88 | 0.00 | 0.75 | 0.73 | 0.76 | 0.92 |
90
+ | plasma cell | 24554 | 0.97 | 0.98 | 0.98 | 0.98 | 0.00 | 0.98 | 0.99 | 0.98 | 0.99 |
91
+ | monocyte | 23139 | 0.55 | 0.33 | 0.85 | 0.68 | 0.00 | 0.52 | 0.47 | 0.56 | 0.70 |
92
+ | classical monocyte | 16393 | 0.65 | 0.59 | 0.84 | 0.71 | 0.00 | 0.66 | 0.57 | 0.68 | 0.78 |
93
+ | erythrocyte | 13112 | 0.96 | 0.97 | 0.98 | 0.98 | 0.00 | 0.96 | 0.97 | 0.97 | 0.98 |
94
+ | natural killer cell | 12819 | 0.72 | 0.74 | 0.85 | 0.80 | 0.00 | 0.73 | 0.69 | 0.73 | 0.77 |
95
+ | naive thymus-derived CD4-positive, alpha-beta T cell | 8825 | 0.24 | 0.05 | 0.45 | 0.22 | 0.00 | 0.26 | 0.24 | 0.32 | 0.40 |
96
+ | T cell | 5680 | 0.42 | 0.28 | 0.69 | 0.37 | 0.00 | 0.41 | 0.35 | 0.47 | 0.63 |
97
+ | mast cell | 5640 | 0.84 | 0.86 | 0.97 | 0.92 | 0.00 | 0.96 | 0.90 | 0.92 | 0.96 |
98
+ | intermediate monocyte | 4927 | 0.29 | 0.10 | 0.69 | 0.43 | 0.00 | 0.38 | 0.34 | 0.45 | 0.53 |
99
+ | mature NK T cell | 4854 | 0.46 | 0.51 | 0.74 | 0.55 | 0.00 | 0.57 | 0.41 | 0.49 | 0.65 |
100
+ | mononuclear phagocyte | 4782 | 0.57 | 0.00 | 0.93 | 0.44 | 0.00 | 0.87 | 0.60 | 0.59 | 0.91 |
101
+ | CD4-positive, alpha-beta thymocyte | 4224 | 0.40 | 0.01 | 0.71 | 0.45 | 0.00 | 0.60 | 0.37 | 0.45 | 0.67 |
102
+ | regulatory T cell | 2356 | 0.27 | 0.04 | 0.55 | 0.27 | 0.00 | 0.27 | 0.27 | 0.36 | 0.50 |
103
+ | hematopoietic precursor cell | 1931 | 0.51 | 0.65 | 0.86 | 0.77 | 0.00 | 0.58 | 0.56 | 0.61 | 0.76 |
104
+ | gamma-delta T cell | 1783 | 0.64 | 0.27 | 0.85 | 0.44 | 0.00 | 0.55 | 0.60 | 0.51 | 0.81 |
105
+ | basophil | 1503 | 0.44 | 0.01 | 0.95 | 0.71 | 0.00 | 0.85 | 0.65 | 0.79 | 0.91 |
106
+ | tissue-resident macrophage | 1219 | 0.72 | 0.00 | 0.89 | 0.64 | 0.00 | 0.40 | 0.65 | 0.57 | 0.79 |
107
+ | non-classical monocyte | 1171 | 0.11 | 0.33 | 0.58 | 0.33 | 0.00 | 0.31 | 0.28 | 0.40 | 0.60 |
108
+ | activated CD8-positive, alpha-beta T cell | 1029 | 0.43 | 0.00 | 0.50 | 0.17 | 0.00 | 0.45 | 0.29 | 0.36 | 0.69 |
109
+ | naive thymus-derived CD8-positive, alpha-beta T cell | 944 | 0.12 | 0.00 | 0.62 | 0.29 | 0.00 | 0.21 | 0.14 | 0.15 | 0.31 |
110
+ | myeloid leukocyte | 898 | 0.27 | 0.01 | 0.75 | 0.27 | 0.00 | 0.20 | 0.27 | 0.27 | 0.71 |
111
+ | erythroid progenitor cell | 865 | 0.60 | 0.57 | 0.82 | 0.79 | 0.00 | 0.62 | 0.73 | 0.75 | 0.79 |
112
+ | innate lymphoid cell | 887 | 0.23 | 0.09 | 0.58 | 0.48 | 0.00 | 0.47 | 0.25 | 0.27 | 0.46 |
113
+ | hematopoietic stem cell | 786 | 0.70 | 0.70 | 0.86 | 0.81 | 0.00 | 0.77 | 0.81 | 0.86 | 0.86 |
114
+ | granulocyte | 700 | 0.22 | 0.00 | 0.73 | 0.61 | 0.00 | 0.13 | 0.30 | 0.33 | 0.58 |
115
+ | CD8-positive, alpha-beta thymocyte | 661 | 0.41 | 0.01 | 0.58 | 0.33 | 0.00 | 0.52 | 0.32 | 0.43 | 0.71 |
116
+ | activated CD4-positive, alpha-beta T cell | 512 | 0.05 | 0.00 | 0.48 | 0.13 | 0.00 | 0.29 | 0.13 | 0.14 | 0.35 |
117
+ | myeloid dendritic cell | 524 | 0.16 | 0.07 | 0.57 | 0.39 | 0.00 | 0.22 | 0.20 | 0.24 | 0.32 |
118
+ | platelet | 441 | 0.66 | 0.88 | 0.97 | 0.95 | 0.00 | 0.60 | 0.86 | 0.80 | 0.91 |
119
+ | common myeloid progenitor | 417 | 0.29 | 0.42 | 0.84 | 0.77 | 0.00 | 0.66 | 0.78 | 0.89 | 0.89 |
120
+ | thymocyte | 412 | 0.00 | 0.00 | 0.53 | 0.32 | 0.00 | 0.32 | 0.26 | 0.59 | 0.90 |
121
+ | microglial cell | 353 | 0.05 | 0.01 | 0.61 | 0.16 | 0.00 | 0.27 | 0.21 | 0.22 | 0.49 |
122
+ | colon macrophage | 286 | 0.23 | 0.00 | 0.81 | 0.33 | 0.00 | 0.12 | 0.28 | 0.38 | 0.74 |
123
+ | leukocyte | 171 | 0.11 | 0.00 | 0.49 | 0.20 | 0.00 | 0.33 | 0.16 | 0.19 | 0.38 |
124
+ | plasmacytoid dendritic cell | 91 | 0.00 | 0.32 | 0.79 | 0.66 | 0.00 | 0.18 | 0.44 | 0.52 | 0.69 |
125
+ | hematopoietic cell | 90 | 0.00 | 0.00 | 0.98 | 0.75 | 0.00 | 0.14 | 0.97 | 0.53 | 0.92 |
126
+ | myeloid cell | 79 | 0.00 | 0.00 | 0.33 | 0.14 | 0.00 | 0.46 | 0.51 | 0.30 | 0.88 |
127
+ | Langerhans cell | 69 | 0.57 | 0.05 | 0.76 | 0.51 | 0.00 | 0.13 | 0.30 | 0.27 | 0.72 |
128
+ | T follicular helper cell | 6 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.08 | 1.00 | 0.67 | 0.80 |
129
+ | erythroid lineage cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.06 | 0.18 | 1.00 | 0.00 |
130
 
131
  </details>
132