Create README.md
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README.md
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---
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license: mit
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tags:
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- chest-xray
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- medical
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- multimodal
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- retrieval
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- explanation
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- clinicalbert
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- swin-transformer
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- deep-learning
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- image-text
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datasets:
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- openi
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language:
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- en
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---
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# Multimodal Chest X-ray Retrieval & Diagnosis (ClinicalBERT + Swin)
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This model jointly encodes chest X-rays (DICOM) and radiology reports (XML) to:
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- Predict medical conditions from multimodal input (image + text)
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- Retrieve similar cases using shared disease-aware embeddings
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- Provide visual explanations using attention and Integrated Gradients (IG)
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> Developed as a final project at HCMUS.
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---
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## Model Architecture
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- **Image Encoder:** Swin Transformer (pretrained, fine-tuned)
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- **Text Encoder:** ClinicalBERT
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- **Fusion Module:** Cross-modal attention with optional hybrid FFN layers
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- **Losses:** BCE + Focal Loss for multi-label classification
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Embeddings from both modalities are projected into a **shared joint space**, enabling retrieval and explanation.
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---
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## Training Data
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- **Dataset:** [NIH Open-i Chest X-ray Dataset](https://openi.nlm.nih.gov/)
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- **Input Modalities:**
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- Chest X-ray DICOMs
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- Associated XML radiology reports
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- **Labels:** MeSH-derived disease categories (multi-label)
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---
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## Intended Uses
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* Clinical Education: Case similarity search for radiology students
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* Research: Baseline for multimodal medical retrieval
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* Explainability: Visualize disease evidence in both image and text
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## Limitations & Risks
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* Trained on a public dataset (Open-i) — may not generalize to other hospitals
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* Explanations are not clinically validated
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* Not for diagnostic use in real-world settings
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## Acknowledgments
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* NIH Open-i Dataset
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* Swin Transformer (Timm)
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* ClinicalBERT (Emily Alsentzer)
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* Captum (for IG explanations)
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## Links
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GitHub:
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