PACT-Net / logs /bindingdb-bench /gp+tanimoto /gp_selfies_bindingdb_20250729_222201.txt
rk-random's picture
Upload folder using huggingface_hub
9a67fbe verified
raw
history blame
998 Bytes
Experiment: gp+selfies on bindingdb
FOLD 1/5
Training GP model...
Evaluating GP model...
RMSE: 1.6027, MAE: 1.3185, R2: -0.0035
FOLD 2/5
Training GP model...
Evaluating GP model...
RMSE: 1.5107, MAE: 1.2320, R2: -0.0004
FOLD 3/5
Training GP model...
Evaluating GP model...
RMSE: 1.5007, MAE: 1.2661, R2: -0.0257
FOLD 4/5
Training GP model...
Evaluating GP model...
RMSE: 1.5753, MAE: 1.2975, R2: -0.0004
FOLD 5/5
Training GP model...
Evaluating GP model...
RMSE: 1.5153, MAE: 1.2604, R2: -0.0087
====== K-FOLD SUMMARY ======
RMSE: 1.5400 [1.5085, 1.5768]
MAE: 1.2753 [1.2501, 1.3017]
R2: -0.0077 [-0.0172, -0.0010]
★ Using fold 3 model for test inference
Evaluating GP model...
RMSE: 1.8114, MAE: 1.3790, R2: -0.0003
====== HELD-OUT TEST METRICS ======
{'rmse': 1.8113702712418467, 'mae': 1.3790373572231982, 'r2': -0.00034197488555598454}
Test RMSE: 1.8034 (95 % CI: 1.5761–2.0769)
Test MAE : 1.3793 (95 % CI: 1.2702–1.4972)
Test R² : -0.0028 (95 % CI: -0.0139–-0.0000)