license:mit size_categories:n<1K format:csv modality:text library:datasets library:dask library:mlcroissant library:polars region:us biology test_tag1 test_tag2
---
license: mit
configs:
  - config_name: study_meta
    data_files: "study_meta.csv"
  - config_name: gene_expr
    default: true
    data_files:
      - split: GSE
        path: "gene_expr/GSE*.csv"
      - split: E_MTAB
        path: "gene_expr/E_MTAB*.csv"
  - config_name: meta
    data_files:
    - split: GSE
      path: "meta_info/GSE*.csv"
    - split: E_MTAB
      path: "meta_info/E_MTAB*.csv"
tags:
- biology
- test_tag1
- test_tag2
---
This is the testing dataset for gene repo.

The current data structure is as follows:
```
test_repo/
├── README.md
├── study_meta.csv
├── gene_expr/
│    ├── GSE*_gene_expr.csv
│    └── E_MTAB*_gene_expr.csv
└── meta_info/
     ├── GSE*_meta.csv
     └── E_MTAB*_meta.csv
```

The following study_IDs have children studies, detailed is shown in *study_meta.csv*
```
GSE73072
  ├── GSE17156
  ├── GSE30550
  └── GSE52428_1, GSE52428_2
```